Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SNCAIPQ9Y6H5 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SNCAIPQ9Y6H5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
SNCAIPQ9Y6H5 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
SNCAIPQ9Y6H5 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.78■■□□□ 1.88
SNCAIPQ9Y6H5 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
SNCAIPQ9Y6H5 AK1-201ENST00000223836 736 ntTSL 3 BASIC26.77■■□□□ 1.88
SNCAIPQ9Y6H5 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
SNCAIPQ9Y6H5 VGF-203ENST00000611537 1622 ntTSL 5 BASIC26.76■■□□□ 1.87
SNCAIPQ9Y6H5 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
SNCAIPQ9Y6H5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
SNCAIPQ9Y6H5 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
SNCAIPQ9Y6H5 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
SNCAIPQ9Y6H5 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
SNCAIPQ9Y6H5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC26.76■■□□□ 1.87
SNCAIPQ9Y6H5 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
SNCAIPQ9Y6H5 NKILA-201ENST00000613231 537 ntTSL 4 BASIC26.76■■□□□ 1.87
SNCAIPQ9Y6H5 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.76■■□□□ 1.87
SNCAIPQ9Y6H5 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC26.76■■□□□ 1.87
SNCAIPQ9Y6H5 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SNCAIPQ9Y6H5 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
SNCAIPQ9Y6H5 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC26.75■■□□□ 1.87
SNCAIPQ9Y6H5 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC26.75■■□□□ 1.87
SNCAIPQ9Y6H5 IKBKGP1-201ENST00000612193 1073 ntBASIC26.75■■□□□ 1.87
SNCAIPQ9Y6H5 AL031602.1-201ENST00000633169 911 ntBASIC26.75■■□□□ 1.87
SNCAIPQ9Y6H5 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
SNCAIPQ9Y6H5 ASB1-202ENST00000409297 878 ntTSL 5 BASIC26.74■■□□□ 1.87
SNCAIPQ9Y6H5 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC26.74■■□□□ 1.87
SNCAIPQ9Y6H5 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC26.74■■□□□ 1.87
SNCAIPQ9Y6H5 LSR-205ENST00000427250 1606 ntTSL 2 BASIC26.74■■□□□ 1.87
SNCAIPQ9Y6H5 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
SNCAIPQ9Y6H5 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
SNCAIPQ9Y6H5 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SNCAIPQ9Y6H5 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC26.73■■□□□ 1.87
SNCAIPQ9Y6H5 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SNCAIPQ9Y6H5 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
SNCAIPQ9Y6H5 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
SNCAIPQ9Y6H5 AC034268.1-201ENST00000441047 882 ntBASIC26.73■■□□□ 1.87
SNCAIPQ9Y6H5 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC26.73■■□□□ 1.87
SNCAIPQ9Y6H5 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SNCAIPQ9Y6H5 RARRES2P11-201ENST00000635158 484 ntBASIC26.73■■□□□ 1.87
SNCAIPQ9Y6H5 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SNCAIPQ9Y6H5 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC26.73■■□□□ 1.87
SNCAIPQ9Y6H5 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC26.73■■□□□ 1.87
SNCAIPQ9Y6H5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SNCAIPQ9Y6H5 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
SNCAIPQ9Y6H5 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SNCAIPQ9Y6H5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
SNCAIPQ9Y6H5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SNCAIPQ9Y6H5 AC090192.1-201ENST00000517740 490 ntBASIC26.72■■□□□ 1.87
SNCAIPQ9Y6H5 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SNCAIPQ9Y6H5 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SNCAIPQ9Y6H5 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.72■■□□□ 1.87
SNCAIPQ9Y6H5 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
SNCAIPQ9Y6H5 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC26.71■■□□□ 1.87
SNCAIPQ9Y6H5 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.71■■□□□ 1.87
SNCAIPQ9Y6H5 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
SNCAIPQ9Y6H5 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC26.71■■□□□ 1.87
SNCAIPQ9Y6H5 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC26.71■■□□□ 1.87
SNCAIPQ9Y6H5 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.7■■□□□ 1.87
SNCAIPQ9Y6H5 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
SNCAIPQ9Y6H5 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.86
SNCAIPQ9Y6H5 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SNCAIPQ9Y6H5 KRT18P5-201ENST00000436075 1291 ntBASIC26.7■■□□□ 1.86
SNCAIPQ9Y6H5 AC022517.1-201ENST00000592429 346 ntBASIC26.7■■□□□ 1.86
SNCAIPQ9Y6H5 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC26.7■■□□□ 1.86
SNCAIPQ9Y6H5 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
SNCAIPQ9Y6H5 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC26.7■■□□□ 1.86
SNCAIPQ9Y6H5 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC26.69■■□□□ 1.86
SNCAIPQ9Y6H5 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
SNCAIPQ9Y6H5 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC26.69■■□□□ 1.86
SNCAIPQ9Y6H5 YBX1P1-201ENST00000445822 960 ntBASIC26.69■■□□□ 1.86
SNCAIPQ9Y6H5 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
SNCAIPQ9Y6H5 pRNA.6-201ENST00000610482 90 ntBASIC26.69■■□□□ 1.86
SNCAIPQ9Y6H5 pRNA.5-201ENST00000612139 90 ntBASIC26.69■■□□□ 1.86
SNCAIPQ9Y6H5 pRNA.11-201ENST00000618423 90 ntBASIC26.69■■□□□ 1.86
SNCAIPQ9Y6H5 pRNA.13-201ENST00000619112 90 ntBASIC26.69■■□□□ 1.86
SNCAIPQ9Y6H5 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC26.69■■□□□ 1.86
SNCAIPQ9Y6H5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC26.69■■□□□ 1.86
SNCAIPQ9Y6H5 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
SNCAIPQ9Y6H5 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SNCAIPQ9Y6H5 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
SNCAIPQ9Y6H5 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC26.68■■□□□ 1.86
SNCAIPQ9Y6H5 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SNCAIPQ9Y6H5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SNCAIPQ9Y6H5 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SNCAIPQ9Y6H5 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC26.68■■□□□ 1.86
SNCAIPQ9Y6H5 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
SNCAIPQ9Y6H5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
SNCAIPQ9Y6H5 AL121749.1-202ENST00000609313 2153 ntBASIC26.67■■□□□ 1.86
SNCAIPQ9Y6H5 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SNCAIPQ9Y6H5 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC26.67■■□□□ 1.86
SNCAIPQ9Y6H5 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC26.67■■□□□ 1.86
SNCAIPQ9Y6H5 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC26.67■■□□□ 1.86
SNCAIPQ9Y6H5 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.67■■□□□ 1.86
SNCAIPQ9Y6H5 AC126544.1-201ENST00000580842 1059 ntBASIC26.67■■□□□ 1.86
SNCAIPQ9Y6H5 CD37-213ENST00000598095 1598 ntTSL 2 BASIC26.67■■□□□ 1.86
SNCAIPQ9Y6H5 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SNCAIPQ9Y6H5 USF2-207ENST00000595068 1612 ntTSL 5 BASIC26.66■■□□□ 1.86
SNCAIPQ9Y6H5 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC26.66■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms