Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.2■□□□□ 0.98
RLIMQ9NVW2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RLIMQ9NVW2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RLIMQ9NVW2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RLIMQ9NVW2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RLIMQ9NVW2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RLIMQ9NVW2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RLIMQ9NVW2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RLIMQ9NVW2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RLIMQ9NVW2 AL033527.3-201ENST00000566366 1196 ntBASIC21.19■□□□□ 0.98
RLIMQ9NVW2 AC011551.1-201ENST00000614101 683 ntBASIC21.19■□□□□ 0.98
RLIMQ9NVW2 AC012354.3-201ENST00000623734 483 ntBASIC21.19■□□□□ 0.98
RLIMQ9NVW2 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RLIMQ9NVW2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RLIMQ9NVW2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RLIMQ9NVW2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.18■□□□□ 0.98
RLIMQ9NVW2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RLIMQ9NVW2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RLIMQ9NVW2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RLIMQ9NVW2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.18■□□□□ 0.98
RLIMQ9NVW2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.18■□□□□ 0.98
RLIMQ9NVW2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RLIMQ9NVW2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.18■□□□□ 0.98
RLIMQ9NVW2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RLIMQ9NVW2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.18■□□□□ 0.98
RLIMQ9NVW2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RLIMQ9NVW2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RLIMQ9NVW2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RLIMQ9NVW2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RLIMQ9NVW2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RLIMQ9NVW2 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RLIMQ9NVW2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.17■□□□□ 0.98
RLIMQ9NVW2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.17■□□□□ 0.98
RLIMQ9NVW2 AC074183.2-201ENST00000623112 922 ntBASIC21.17■□□□□ 0.98
RLIMQ9NVW2 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.17■□□□□ 0.98
RLIMQ9NVW2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RLIMQ9NVW2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RLIMQ9NVW2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RLIMQ9NVW2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
RLIMQ9NVW2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.17■□□□□ 0.98
RLIMQ9NVW2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RLIMQ9NVW2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
RLIMQ9NVW2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RLIMQ9NVW2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RLIMQ9NVW2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.16■□□□□ 0.98
RLIMQ9NVW2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RLIMQ9NVW2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RLIMQ9NVW2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RLIMQ9NVW2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.16■□□□□ 0.98
RLIMQ9NVW2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RLIMQ9NVW2 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RLIMQ9NVW2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.15■□□□□ 0.98
RLIMQ9NVW2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RLIMQ9NVW2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RLIMQ9NVW2 AC120024.1-201ENST00000562672 995 ntBASIC21.15■□□□□ 0.98
RLIMQ9NVW2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
RLIMQ9NVW2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RLIMQ9NVW2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RLIMQ9NVW2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.14■□□□□ 0.98
RLIMQ9NVW2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
RLIMQ9NVW2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
RLIMQ9NVW2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.14■□□□□ 0.97
RLIMQ9NVW2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.14■□□□□ 0.97
RLIMQ9NVW2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RLIMQ9NVW2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RLIMQ9NVW2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RLIMQ9NVW2 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
RLIMQ9NVW2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RLIMQ9NVW2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.13■□□□□ 0.97
RLIMQ9NVW2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.13■□□□□ 0.97
RLIMQ9NVW2 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RLIMQ9NVW2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RLIMQ9NVW2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RLIMQ9NVW2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.13■□□□□ 0.97
RLIMQ9NVW2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.13■□□□□ 0.97
RLIMQ9NVW2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RLIMQ9NVW2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
RLIMQ9NVW2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.12■□□□□ 0.97
RLIMQ9NVW2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
RLIMQ9NVW2 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RLIMQ9NVW2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.12■□□□□ 0.97
RLIMQ9NVW2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RLIMQ9NVW2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RLIMQ9NVW2 AL022069.1-201ENST00000568025 1636 ntBASIC21.11■□□□□ 0.97
RLIMQ9NVW2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.11■□□□□ 0.97
RLIMQ9NVW2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.11■□□□□ 0.97
RLIMQ9NVW2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RLIMQ9NVW2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.11■□□□□ 0.97
RLIMQ9NVW2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.11■□□□□ 0.97
RLIMQ9NVW2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
RLIMQ9NVW2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
RLIMQ9NVW2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.11■□□□□ 0.97
RLIMQ9NVW2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RLIMQ9NVW2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.11■□□□□ 0.97
RLIMQ9NVW2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RLIMQ9NVW2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RLIMQ9NVW2 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RLIMQ9NVW2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.11■□□□□ 0.97
RLIMQ9NVW2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RLIMQ9NVW2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms