Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC15.19■□□□□ 0.02
SND1-IT1Q9HBX3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
SND1-IT1Q9HBX3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SND1-IT1Q9HBX3 SMPD5-203ENST00000639008 1464 ntBASIC15.19■□□□□ 0.02
SND1-IT1Q9HBX3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SND1-IT1Q9HBX3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC15.18■□□□□ 0.02
SND1-IT1Q9HBX3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SND1-IT1Q9HBX3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SND1-IT1Q9HBX3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SND1-IT1Q9HBX3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SND1-IT1Q9HBX3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SND1-IT1Q9HBX3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SND1-IT1Q9HBX3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SND1-IT1Q9HBX3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SND1-IT1Q9HBX3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SND1-IT1Q9HBX3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
SND1-IT1Q9HBX3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SND1-IT1Q9HBX3 MIR3648-2-201ENST00000581792 180 ntBASIC15.18■□□□□ 0.02
SND1-IT1Q9HBX3 MIR3648-1-201ENST00000615959 180 ntBASIC15.18■□□□□ 0.02
SND1-IT1Q9HBX3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SND1-IT1Q9HBX3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SND1-IT1Q9HBX3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SND1-IT1Q9HBX3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SND1-IT1Q9HBX3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SND1-IT1Q9HBX3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SND1-IT1Q9HBX3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SND1-IT1Q9HBX3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SND1-IT1Q9HBX3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SND1-IT1Q9HBX3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SND1-IT1Q9HBX3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SND1-IT1Q9HBX3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SND1-IT1Q9HBX3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SND1-IT1Q9HBX3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SND1-IT1Q9HBX3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SND1-IT1Q9HBX3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC15.17■□□□□ 0.02
SND1-IT1Q9HBX3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
SND1-IT1Q9HBX3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC15.17■□□□□ 0.02
SND1-IT1Q9HBX3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SND1-IT1Q9HBX3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SND1-IT1Q9HBX3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SND1-IT1Q9HBX3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SND1-IT1Q9HBX3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SND1-IT1Q9HBX3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SND1-IT1Q9HBX3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SND1-IT1Q9HBX3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SND1-IT1Q9HBX3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SND1-IT1Q9HBX3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SND1-IT1Q9HBX3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SND1-IT1Q9HBX3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SND1-IT1Q9HBX3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SND1-IT1Q9HBX3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SND1-IT1Q9HBX3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SND1-IT1Q9HBX3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SND1-IT1Q9HBX3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SND1-IT1Q9HBX3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SND1-IT1Q9HBX3 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SND1-IT1Q9HBX3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SND1-IT1Q9HBX3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SND1-IT1Q9HBX3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SND1-IT1Q9HBX3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SND1-IT1Q9HBX3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC15.15■□□□□ 0.02
SND1-IT1Q9HBX3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC15.15■□□□□ 0.02
SND1-IT1Q9HBX3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SND1-IT1Q9HBX3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SND1-IT1Q9HBX3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SND1-IT1Q9HBX3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SND1-IT1Q9HBX3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SND1-IT1Q9HBX3 LINC00526-201ENST00000581067 1875 ntBASIC15.15■□□□□ 0.02
SND1-IT1Q9HBX3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SND1-IT1Q9HBX3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SND1-IT1Q9HBX3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SND1-IT1Q9HBX3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC15.15■□□□□ 0.02
SND1-IT1Q9HBX3 AC060814.1-201ENST00000554326 538 ntBASIC15.15■□□□□ 0.02
SND1-IT1Q9HBX3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC15.15■□□□□ 0.02
SND1-IT1Q9HBX3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SND1-IT1Q9HBX3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SND1-IT1Q9HBX3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC15.15■□□□□ 0.02
SND1-IT1Q9HBX3 AC127496.7-201ENST00000625110 1798 ntBASIC15.15■□□□□ 0.02
SND1-IT1Q9HBX3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SND1-IT1Q9HBX3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC15.15■□□□□ 0.02
SND1-IT1Q9HBX3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SND1-IT1Q9HBX3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SND1-IT1Q9HBX3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SND1-IT1Q9HBX3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SND1-IT1Q9HBX3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SND1-IT1Q9HBX3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SND1-IT1Q9HBX3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SND1-IT1Q9HBX3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SND1-IT1Q9HBX3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SND1-IT1Q9HBX3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC15.14■□□□□ 0.01
SND1-IT1Q9HBX3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC15.14■□□□□ 0.01
SND1-IT1Q9HBX3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SND1-IT1Q9HBX3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC15.14■□□□□ 0.01
SND1-IT1Q9HBX3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC15.14■□□□□ 0.01
SND1-IT1Q9HBX3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC15.14■□□□□ 0.01
SND1-IT1Q9HBX3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SND1-IT1Q9HBX3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SND1-IT1Q9HBX3 REST-210ENST00000638187 1334 ntTSL 5 BASIC15.14■□□□□ 0.01
SND1-IT1Q9HBX3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SND1-IT1Q9HBX3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms