Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.82■■□□□ 1.08
BRF2Q9HAW0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
BRF2Q9HAW0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.82■■□□□ 1.08
BRF2Q9HAW0 AC092068.2-201ENST00000590491 1708 ntBASIC21.82■■□□□ 1.08
BRF2Q9HAW0 ANOS2P-203ENST00000472227 1816 ntBASIC21.82■■□□□ 1.08
BRF2Q9HAW0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
BRF2Q9HAW0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
BRF2Q9HAW0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
BRF2Q9HAW0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.81■■□□□ 1.08
BRF2Q9HAW0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
BRF2Q9HAW0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.81■■□□□ 1.08
BRF2Q9HAW0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.81■■□□□ 1.08
BRF2Q9HAW0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
BRF2Q9HAW0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.81■■□□□ 1.08
BRF2Q9HAW0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
BRF2Q9HAW0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BRF2Q9HAW0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BRF2Q9HAW0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BRF2Q9HAW0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BRF2Q9HAW0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.8■■□□□ 1.08
BRF2Q9HAW0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.8■■□□□ 1.08
BRF2Q9HAW0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.8■■□□□ 1.08
BRF2Q9HAW0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
BRF2Q9HAW0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BRF2Q9HAW0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BRF2Q9HAW0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BRF2Q9HAW0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BRF2Q9HAW0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
BRF2Q9HAW0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
BRF2Q9HAW0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
BRF2Q9HAW0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
BRF2Q9HAW0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BRF2Q9HAW0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.79■■□□□ 1.08
BRF2Q9HAW0 AC137630.3-201ENST00000607245 391 ntBASIC21.79■■□□□ 1.08
BRF2Q9HAW0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.79■■□□□ 1.08
BRF2Q9HAW0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
BRF2Q9HAW0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BRF2Q9HAW0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BRF2Q9HAW0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
BRF2Q9HAW0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BRF2Q9HAW0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BRF2Q9HAW0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.78■■□□□ 1.08
BRF2Q9HAW0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BRF2Q9HAW0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
BRF2Q9HAW0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.78■■□□□ 1.08
BRF2Q9HAW0 AL031848.2-201ENST00000607670 837 ntBASIC21.78■■□□□ 1.08
BRF2Q9HAW0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BRF2Q9HAW0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.78■■□□□ 1.08
BRF2Q9HAW0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
BRF2Q9HAW0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BRF2Q9HAW0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BRF2Q9HAW0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BRF2Q9HAW0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
BRF2Q9HAW0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BRF2Q9HAW0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.77■■□□□ 1.08
BRF2Q9HAW0 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BRF2Q9HAW0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.77■■□□□ 1.08
BRF2Q9HAW0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
BRF2Q9HAW0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
BRF2Q9HAW0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
BRF2Q9HAW0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BRF2Q9HAW0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.76■■□□□ 1.07
BRF2Q9HAW0 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BRF2Q9HAW0 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
BRF2Q9HAW0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BRF2Q9HAW0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
BRF2Q9HAW0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
BRF2Q9HAW0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.76■■□□□ 1.07
BRF2Q9HAW0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.76■■□□□ 1.07
BRF2Q9HAW0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
BRF2Q9HAW0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BRF2Q9HAW0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BRF2Q9HAW0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
BRF2Q9HAW0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BRF2Q9HAW0 AC012676.1-201ENST00000574705 1949 ntBASIC21.75■■□□□ 1.07
BRF2Q9HAW0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.75■■□□□ 1.07
BRF2Q9HAW0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.75■■□□□ 1.07
BRF2Q9HAW0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
BRF2Q9HAW0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
BRF2Q9HAW0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.75■■□□□ 1.07
BRF2Q9HAW0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BRF2Q9HAW0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BRF2Q9HAW0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BRF2Q9HAW0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BRF2Q9HAW0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
BRF2Q9HAW0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.74■■□□□ 1.07
BRF2Q9HAW0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.74■■□□□ 1.07
BRF2Q9HAW0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BRF2Q9HAW0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.74■■□□□ 1.07
BRF2Q9HAW0 SNX5-217ENST00000606557 1087 ntBASIC21.74■■□□□ 1.07
BRF2Q9HAW0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BRF2Q9HAW0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
BRF2Q9HAW0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BRF2Q9HAW0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.74■■□□□ 1.07
BRF2Q9HAW0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.74■■□□□ 1.07
BRF2Q9HAW0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
BRF2Q9HAW0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
BRF2Q9HAW0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BRF2Q9HAW0 AC068473.5-201ENST00000616428 2072 ntBASIC21.73■■□□□ 1.07
BRF2Q9HAW0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms