Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC13.45□□□□□ -0.26
CYSTM1Q9H1C7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CYSTM1Q9H1C7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC13.45□□□□□ -0.26
CYSTM1Q9H1C7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CYSTM1Q9H1C7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CYSTM1Q9H1C7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CYSTM1Q9H1C7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
CYSTM1Q9H1C7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CYSTM1Q9H1C7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC13.44□□□□□ -0.26
CYSTM1Q9H1C7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CYSTM1Q9H1C7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
CYSTM1Q9H1C7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CYSTM1Q9H1C7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
CYSTM1Q9H1C7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CYSTM1Q9H1C7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CYSTM1Q9H1C7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CYSTM1Q9H1C7 AC010864.1-201ENST00000609407 1511 ntBASIC13.44□□□□□ -0.26
CYSTM1Q9H1C7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CYSTM1Q9H1C7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CYSTM1Q9H1C7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CYSTM1Q9H1C7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CYSTM1Q9H1C7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CYSTM1Q9H1C7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CYSTM1Q9H1C7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CYSTM1Q9H1C7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CYSTM1Q9H1C7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CYSTM1Q9H1C7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CYSTM1Q9H1C7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC13.43□□□□□ -0.26
CYSTM1Q9H1C7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC13.43□□□□□ -0.26
CYSTM1Q9H1C7 BID-212ENST00000614949 1988 ntTSL 5 BASIC13.43□□□□□ -0.26
CYSTM1Q9H1C7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
CYSTM1Q9H1C7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CYSTM1Q9H1C7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CYSTM1Q9H1C7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CYSTM1Q9H1C7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CYSTM1Q9H1C7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CYSTM1Q9H1C7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC13.43□□□□□ -0.26
CYSTM1Q9H1C7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CYSTM1Q9H1C7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CYSTM1Q9H1C7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CYSTM1Q9H1C7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CYSTM1Q9H1C7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CYSTM1Q9H1C7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CYSTM1Q9H1C7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CYSTM1Q9H1C7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CYSTM1Q9H1C7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC13.42□□□□□ -0.26
CYSTM1Q9H1C7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CYSTM1Q9H1C7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CYSTM1Q9H1C7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CYSTM1Q9H1C7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CYSTM1Q9H1C7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CYSTM1Q9H1C7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CYSTM1Q9H1C7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CYSTM1Q9H1C7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CYSTM1Q9H1C7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CYSTM1Q9H1C7 LINC01521-201ENST00000504184 1943 ntBASIC13.42□□□□□ -0.26
CYSTM1Q9H1C7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CYSTM1Q9H1C7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CYSTM1Q9H1C7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CYSTM1Q9H1C7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CYSTM1Q9H1C7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
CYSTM1Q9H1C7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
CYSTM1Q9H1C7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CYSTM1Q9H1C7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC13.41□□□□□ -0.26
CYSTM1Q9H1C7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
CYSTM1Q9H1C7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CYSTM1Q9H1C7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CYSTM1Q9H1C7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CYSTM1Q9H1C7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
CYSTM1Q9H1C7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CYSTM1Q9H1C7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CYSTM1Q9H1C7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CYSTM1Q9H1C7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CYSTM1Q9H1C7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CYSTM1Q9H1C7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CYSTM1Q9H1C7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC13.41□□□□□ -0.26
CYSTM1Q9H1C7 AC005229.4-201ENST00000610085 2198 ntBASIC13.41□□□□□ -0.26
CYSTM1Q9H1C7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CYSTM1Q9H1C7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CYSTM1Q9H1C7 AC018358.1-201ENST00000631079 1402 ntBASIC13.4□□□□□ -0.26
CYSTM1Q9H1C7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CYSTM1Q9H1C7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CYSTM1Q9H1C7 SLC6A10P-202ENST00000431994 2058 ntBASIC13.4□□□□□ -0.26
CYSTM1Q9H1C7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CYSTM1Q9H1C7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC13.4□□□□□ -0.26
CYSTM1Q9H1C7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CYSTM1Q9H1C7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
CYSTM1Q9H1C7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CYSTM1Q9H1C7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CYSTM1Q9H1C7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
CYSTM1Q9H1C7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
CYSTM1Q9H1C7 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CYSTM1Q9H1C7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CYSTM1Q9H1C7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CYSTM1Q9H1C7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC13.4□□□□□ -0.26
CYSTM1Q9H1C7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC13.4□□□□□ -0.26
CYSTM1Q9H1C7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CYSTM1Q9H1C7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CYSTM1Q9H1C7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CYSTM1Q9H1C7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms