Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
LCE3DQ9BYE3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
LCE3DQ9BYE3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
LCE3DQ9BYE3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC6.14□□□□□ -1.43
LCE3DQ9BYE3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC6.14□□□□□ -1.43
LCE3DQ9BYE3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC6.14□□□□□ -1.43
LCE3DQ9BYE3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
LCE3DQ9BYE3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 AC137767.1-201ENST00000602918 1920 ntBASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 AC136428.2-201ENST00000563187 214 ntBASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 HNRNPLP2-201ENST00000568980 1570 ntBASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
LCE3DQ9BYE3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LCE3DQ9BYE3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC6.12□□□□□ -1.43
LCE3DQ9BYE3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
LCE3DQ9BYE3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LCE3DQ9BYE3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LCE3DQ9BYE3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LCE3DQ9BYE3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LCE3DQ9BYE3 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
LCE3DQ9BYE3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LCE3DQ9BYE3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LCE3DQ9BYE3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LCE3DQ9BYE3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
LCE3DQ9BYE3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
LCE3DQ9BYE3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
LCE3DQ9BYE3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
LCE3DQ9BYE3 LINC00526-201ENST00000581067 1875 ntBASIC6.12□□□□□ -1.43
LCE3DQ9BYE3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
LCE3DQ9BYE3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
LCE3DQ9BYE3 MIR6089-201ENST00000616698 64 ntBASIC6.12□□□□□ -1.43
LCE3DQ9BYE3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
LCE3DQ9BYE3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LCE3DQ9BYE3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
LCE3DQ9BYE3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
LCE3DQ9BYE3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LCE3DQ9BYE3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
LCE3DQ9BYE3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
LCE3DQ9BYE3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
LCE3DQ9BYE3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
LCE3DQ9BYE3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
LCE3DQ9BYE3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
LCE3DQ9BYE3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
LCE3DQ9BYE3 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms