Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHRDL1Q9BU40 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHRDL1Q9BU40 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CHRDL1Q9BU40 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRDL1Q9BU40 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRDL1Q9BU40 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRDL1Q9BU40 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.97■□□□□ 0.47
CHRDL1Q9BU40 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.97■□□□□ 0.47
CHRDL1Q9BU40 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRDL1Q9BU40 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.97■□□□□ 0.47
CHRDL1Q9BU40 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CHRDL1Q9BU40 AL033527.3-201ENST00000566366 1196 ntBASIC17.97■□□□□ 0.47
CHRDL1Q9BU40 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRDL1Q9BU40 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CHRDL1Q9BU40 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRDL1Q9BU40 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRDL1Q9BU40 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC17.97■□□□□ 0.47
CHRDL1Q9BU40 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CHRDL1Q9BU40 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.97■□□□□ 0.47
CHRDL1Q9BU40 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CHRDL1Q9BU40 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC17.96■□□□□ 0.47
CHRDL1Q9BU40 AC010980.1-201ENST00000587192 1142 ntBASIC17.96■□□□□ 0.47
CHRDL1Q9BU40 PVT1_1.1-201ENST00000615125 194 ntBASIC17.96■□□□□ 0.47
CHRDL1Q9BU40 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CHRDL1Q9BU40 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRDL1Q9BU40 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CHRDL1Q9BU40 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CHRDL1Q9BU40 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.96■□□□□ 0.46
CHRDL1Q9BU40 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.96■□□□□ 0.46
CHRDL1Q9BU40 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRDL1Q9BU40 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRDL1Q9BU40 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.95■□□□□ 0.46
CHRDL1Q9BU40 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.95■□□□□ 0.46
CHRDL1Q9BU40 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRDL1Q9BU40 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.95■□□□□ 0.46
CHRDL1Q9BU40 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRDL1Q9BU40 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.95■□□□□ 0.46
CHRDL1Q9BU40 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRDL1Q9BU40 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
CHRDL1Q9BU40 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CHRDL1Q9BU40 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRDL1Q9BU40 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.94■□□□□ 0.46
CHRDL1Q9BU40 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRDL1Q9BU40 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRDL1Q9BU40 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRDL1Q9BU40 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRDL1Q9BU40 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRDL1Q9BU40 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CHRDL1Q9BU40 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.94■□□□□ 0.46
CHRDL1Q9BU40 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.94■□□□□ 0.46
CHRDL1Q9BU40 AC074183.2-201ENST00000623112 922 ntBASIC17.94■□□□□ 0.46
CHRDL1Q9BU40 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.94■□□□□ 0.46
CHRDL1Q9BU40 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRDL1Q9BU40 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRDL1Q9BU40 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHRDL1Q9BU40 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRDL1Q9BU40 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRDL1Q9BU40 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRDL1Q9BU40 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRDL1Q9BU40 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CHRDL1Q9BU40 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHRDL1Q9BU40 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CHRDL1Q9BU40 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHRDL1Q9BU40 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
CHRDL1Q9BU40 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC17.93■□□□□ 0.46
CHRDL1Q9BU40 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CHRDL1Q9BU40 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.93■□□□□ 0.46
CHRDL1Q9BU40 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.93■□□□□ 0.46
CHRDL1Q9BU40 AC022616.5-201ENST00000518796 181 ntBASIC17.93■□□□□ 0.46
CHRDL1Q9BU40 ABCB10P4-201ENST00000566803 2184 ntBASIC17.93■□□□□ 0.46
CHRDL1Q9BU40 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRDL1Q9BU40 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.92■□□□□ 0.46
CHRDL1Q9BU40 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRDL1Q9BU40 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRDL1Q9BU40 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CHRDL1Q9BU40 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.92■□□□□ 0.46
CHRDL1Q9BU40 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC17.92■□□□□ 0.46
CHRDL1Q9BU40 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHRDL1Q9BU40 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC17.92■□□□□ 0.46
CHRDL1Q9BU40 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.92■□□□□ 0.46
CHRDL1Q9BU40 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CHRDL1Q9BU40 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHRDL1Q9BU40 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
CHRDL1Q9BU40 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRDL1Q9BU40 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.91■□□□□ 0.46
CHRDL1Q9BU40 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.91■□□□□ 0.46
CHRDL1Q9BU40 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.91■□□□□ 0.46
CHRDL1Q9BU40 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.91■□□□□ 0.46
CHRDL1Q9BU40 AC011551.1-201ENST00000614101 683 ntBASIC17.91■□□□□ 0.46
CHRDL1Q9BU40 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRDL1Q9BU40 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
CHRDL1Q9BU40 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRDL1Q9BU40 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CHRDL1Q9BU40 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.9■□□□□ 0.46
CHRDL1Q9BU40 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRDL1Q9BU40 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRDL1Q9BU40 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CHRDL1Q9BU40 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRDL1Q9BU40 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.9■□□□□ 0.46
CHRDL1Q9BU40 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms