Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
RPGRQ92834 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
RPGRQ92834 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC28.36■■■□□ 2.13
RPGRQ92834 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
RPGRQ92834 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC28.36■■■□□ 2.13
RPGRQ92834 CEBPA-AS1-201ENST00000592982 2198 ntBASIC28.35■■■□□ 2.13
RPGRQ92834 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
RPGRQ92834 BX842568.3-201ENST00000418104 571 ntBASIC28.35■■■□□ 2.13
RPGRQ92834 GRAMD4P2-201ENST00000423297 1097 ntBASIC28.35■■■□□ 2.13
RPGRQ92834 MPST-208ENST00000628507 698 ntTSL 5 BASIC28.35■■■□□ 2.13
RPGRQ92834 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RPGRQ92834 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
RPGRQ92834 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
RPGRQ92834 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
RPGRQ92834 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
RPGRQ92834 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
RPGRQ92834 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
RPGRQ92834 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC28.33■■■□□ 2.13
RPGRQ92834 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
RPGRQ92834 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC28.33■■■□□ 2.13
RPGRQ92834 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC28.33■■■□□ 2.13
RPGRQ92834 NKILA-201ENST00000613231 537 ntTSL 4 BASIC28.33■■■□□ 2.13
RPGRQ92834 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC28.33■■■□□ 2.13
RPGRQ92834 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC28.33■■■□□ 2.12
RPGRQ92834 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
RPGRQ92834 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
RPGRQ92834 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RPGRQ92834 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RPGRQ92834 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC28.32■■■□□ 2.12
RPGRQ92834 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
RPGRQ92834 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC28.31■■■□□ 2.12
RPGRQ92834 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC28.31■■■□□ 2.12
RPGRQ92834 SP2-202ENST00000613139 908 ntTSL 5 BASIC28.31■■■□□ 2.12
RPGRQ92834 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC28.31■■■□□ 2.12
RPGRQ92834 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC28.31■■■□□ 2.12
RPGRQ92834 DUSP8P4-201ENST00000399538 1761 ntBASIC28.31■■■□□ 2.12
RPGRQ92834 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
RPGRQ92834 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
RPGRQ92834 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
RPGRQ92834 VGF-203ENST00000611537 1622 ntTSL 5 BASIC28.3■■■□□ 2.12
RPGRQ92834 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC28.3■■■□□ 2.12
RPGRQ92834 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC28.3■■■□□ 2.12
RPGRQ92834 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC28.3■■■□□ 2.12
RPGRQ92834 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC28.3■■■□□ 2.12
RPGRQ92834 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC28.3■■■□□ 2.12
RPGRQ92834 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
RPGRQ92834 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC28.29■■■□□ 2.12
RPGRQ92834 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
RPGRQ92834 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC28.29■■■□□ 2.12
RPGRQ92834 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
RPGRQ92834 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
RPGRQ92834 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC28.29■■■□□ 2.12
RPGRQ92834 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
RPGRQ92834 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC28.28■■■□□ 2.12
RPGRQ92834 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC28.28■■■□□ 2.12
RPGRQ92834 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
RPGRQ92834 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
RPGRQ92834 AK1-201ENST00000223836 736 ntTSL 3 BASIC28.27■■■□□ 2.12
RPGRQ92834 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
RPGRQ92834 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC28.27■■■□□ 2.12
RPGRQ92834 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
RPGRQ92834 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
RPGRQ92834 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
RPGRQ92834 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
RPGRQ92834 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC28.26■■■□□ 2.11
RPGRQ92834 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC28.26■■■□□ 2.11
RPGRQ92834 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC28.26■■■□□ 2.11
RPGRQ92834 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
RPGRQ92834 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
RPGRQ92834 USF2-207ENST00000595068 1612 ntTSL 5 BASIC28.25■■■□□ 2.11
RPGRQ92834 CD37-213ENST00000598095 1598 ntTSL 2 BASIC28.25■■■□□ 2.11
RPGRQ92834 SNX3-202ENST00000349379 890 ntTSL 2 BASIC28.25■■■□□ 2.11
RPGRQ92834 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
RPGRQ92834 AC126544.1-201ENST00000580842 1059 ntBASIC28.25■■■□□ 2.11
RPGRQ92834 pRNA.6-201ENST00000610482 90 ntBASIC28.25■■■□□ 2.11
RPGRQ92834 pRNA.5-201ENST00000612139 90 ntBASIC28.25■■■□□ 2.11
RPGRQ92834 pRNA.11-201ENST00000618423 90 ntBASIC28.25■■■□□ 2.11
RPGRQ92834 pRNA.13-201ENST00000619112 90 ntBASIC28.25■■■□□ 2.11
RPGRQ92834 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
RPGRQ92834 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
RPGRQ92834 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
RPGRQ92834 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
RPGRQ92834 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
RPGRQ92834 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
RPGRQ92834 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
RPGRQ92834 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
RPGRQ92834 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
RPGRQ92834 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC28.24■■■□□ 2.11
RPGRQ92834 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
RPGRQ92834 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
RPGRQ92834 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
RPGRQ92834 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RPGRQ92834 AL161729.1-201ENST00000604104 1402 ntBASIC28.23■■■□□ 2.11
RPGRQ92834 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
RPGRQ92834 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
RPGRQ92834 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
RPGRQ92834 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
RPGRQ92834 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
RPGRQ92834 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RPGRQ92834 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC28.22■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms