Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 ZNRF2P3-201ENST00000424200 374 ntBASIC20.58■□□□□ 0.89
PHF3Q92576 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.58■□□□□ 0.89
PHF3Q92576 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PHF3Q92576 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PHF3Q92576 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.58■□□□□ 0.89
PHF3Q92576 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.58■□□□□ 0.88
PHF3Q92576 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PHF3Q92576 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHF3Q92576 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHF3Q92576 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PHF3Q92576 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PHF3Q92576 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHF3Q92576 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.57■□□□□ 0.88
PHF3Q92576 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.57■□□□□ 0.88
PHF3Q92576 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.57■□□□□ 0.88
PHF3Q92576 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PHF3Q92576 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHF3Q92576 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHF3Q92576 MIR6089-201ENST00000616698 64 ntBASIC20.56■□□□□ 0.88
PHF3Q92576 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHF3Q92576 AC131274.2-201ENST00000580697 1507 ntBASIC20.56■□□□□ 0.88
PHF3Q92576 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PHF3Q92576 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PHF3Q92576 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHF3Q92576 RARRES2P6-201ENST00000567333 442 ntBASIC20.56■□□□□ 0.88
PHF3Q92576 AL031432.3-201ENST00000607698 485 ntBASIC20.56■□□□□ 0.88
PHF3Q92576 AC005703.6-201ENST00000623265 1329 ntBASIC20.56■□□□□ 0.88
PHF3Q92576 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PHF3Q92576 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PHF3Q92576 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.55■□□□□ 0.88
PHF3Q92576 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PHF3Q92576 AC004448.1-201ENST00000458332 883 ntBASIC20.55■□□□□ 0.88
PHF3Q92576 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.55■□□□□ 0.88
PHF3Q92576 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PHF3Q92576 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHF3Q92576 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHF3Q92576 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHF3Q92576 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.54■□□□□ 0.88
PHF3Q92576 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.54■□□□□ 0.88
PHF3Q92576 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
PHF3Q92576 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHF3Q92576 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHF3Q92576 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
PHF3Q92576 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
PHF3Q92576 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.54■□□□□ 0.88
PHF3Q92576 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.54■□□□□ 0.88
PHF3Q92576 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PHF3Q92576 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHF3Q92576 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHF3Q92576 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PHF3Q92576 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PHF3Q92576 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PHF3Q92576 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PHF3Q92576 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PHF3Q92576 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
PHF3Q92576 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PHF3Q92576 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PHF3Q92576 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.53■□□□□ 0.88
PHF3Q92576 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.53■□□□□ 0.88
PHF3Q92576 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PHF3Q92576 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PHF3Q92576 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PHF3Q92576 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.53■□□□□ 0.88
PHF3Q92576 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.53■□□□□ 0.88
PHF3Q92576 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PHF3Q92576 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PHF3Q92576 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PHF3Q92576 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PHF3Q92576 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
PHF3Q92576 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PHF3Q92576 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PHF3Q92576 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PHF3Q92576 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PHF3Q92576 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PHF3Q92576 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PHF3Q92576 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.52■□□□□ 0.88
PHF3Q92576 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PHF3Q92576 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.51■□□□□ 0.87
PHF3Q92576 PBX2P1-201ENST00000493219 1291 ntBASIC20.51■□□□□ 0.87
PHF3Q92576 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.51■□□□□ 0.87
PHF3Q92576 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PHF3Q92576 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PHF3Q92576 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PHF3Q92576 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PHF3Q92576 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PHF3Q92576 AC135279.3-201ENST00000610945 1311 ntBASIC20.51■□□□□ 0.87
PHF3Q92576 UNC93B3-201ENST00000308076 687 ntBASIC20.51■□□□□ 0.87
PHF3Q92576 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.51■□□□□ 0.87
PHF3Q92576 AC024257.2-201ENST00000549699 147 ntBASIC20.51■□□□□ 0.87
PHF3Q92576 DUX4L19-201ENST00000557448 1267 ntBASIC20.51■□□□□ 0.87
PHF3Q92576 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PHF3Q92576 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PHF3Q92576 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.5■□□□□ 0.87
PHF3Q92576 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PHF3Q92576 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PHF3Q92576 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.5■□□□□ 0.87
PHF3Q92576 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.5■□□□□ 0.87
PHF3Q92576 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.5■□□□□ 0.87
PHF3Q92576 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.5■□□□□ 0.87
PHF3Q92576 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms