Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.92■■□□□ 1.42
RNF139Q8WU17 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
RNF139Q8WU17 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF139Q8WU17 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
RNF139Q8WU17 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF139Q8WU17 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF139Q8WU17 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.91■■□□□ 1.42
RNF139Q8WU17 AL117332.1-201ENST00000622628 974 ntBASIC23.91■■□□□ 1.42
RNF139Q8WU17 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RNF139Q8WU17 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.91■■□□□ 1.42
RNF139Q8WU17 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF139Q8WU17 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RNF139Q8WU17 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF139Q8WU17 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.9■■□□□ 1.42
RNF139Q8WU17 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.9■■□□□ 1.42
RNF139Q8WU17 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.9■■□□□ 1.42
RNF139Q8WU17 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
RNF139Q8WU17 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RNF139Q8WU17 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RNF139Q8WU17 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.9■■□□□ 1.42
RNF139Q8WU17 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
RNF139Q8WU17 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
RNF139Q8WU17 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
RNF139Q8WU17 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.89■■□□□ 1.42
RNF139Q8WU17 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
RNF139Q8WU17 AC004812.2-201ENST00000611079 2094 ntBASIC23.89■■□□□ 1.41
RNF139Q8WU17 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.89■■□□□ 1.41
RNF139Q8WU17 MIR3621-201ENST00000580529 85 ntBASIC23.89■■□□□ 1.41
RNF139Q8WU17 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
RNF139Q8WU17 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.89■■□□□ 1.41
RNF139Q8WU17 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RNF139Q8WU17 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.89■■□□□ 1.41
RNF139Q8WU17 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
RNF139Q8WU17 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RNF139Q8WU17 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
RNF139Q8WU17 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF139Q8WU17 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RNF139Q8WU17 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
RNF139Q8WU17 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
RNF139Q8WU17 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
RNF139Q8WU17 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
RNF139Q8WU17 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.87■■□□□ 1.41
RNF139Q8WU17 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.87■■□□□ 1.41
RNF139Q8WU17 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF139Q8WU17 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RNF139Q8WU17 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RNF139Q8WU17 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF139Q8WU17 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF139Q8WU17 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.86■■□□□ 1.41
RNF139Q8WU17 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.86■■□□□ 1.41
RNF139Q8WU17 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.86■■□□□ 1.41
RNF139Q8WU17 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF139Q8WU17 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF139Q8WU17 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF139Q8WU17 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF139Q8WU17 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RNF139Q8WU17 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.85■■□□□ 1.41
RNF139Q8WU17 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF139Q8WU17 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF139Q8WU17 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.85■■□□□ 1.41
RNF139Q8WU17 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.85■■□□□ 1.41
RNF139Q8WU17 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.85■■□□□ 1.41
RNF139Q8WU17 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.85■■□□□ 1.41
RNF139Q8WU17 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.85■■□□□ 1.41
RNF139Q8WU17 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.85■■□□□ 1.41
RNF139Q8WU17 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF139Q8WU17 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF139Q8WU17 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RNF139Q8WU17 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.84■■□□□ 1.41
RNF139Q8WU17 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RNF139Q8WU17 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.84■■□□□ 1.41
RNF139Q8WU17 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RNF139Q8WU17 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
RNF139Q8WU17 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF139Q8WU17 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.84■■□□□ 1.41
RNF139Q8WU17 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.84■■□□□ 1.41
RNF139Q8WU17 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RNF139Q8WU17 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
RNF139Q8WU17 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RNF139Q8WU17 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF139Q8WU17 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.83■■□□□ 1.41
RNF139Q8WU17 ALDH1A3-203ENST00000557963 1670 ntBASIC23.83■■□□□ 1.41
RNF139Q8WU17 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF139Q8WU17 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF139Q8WU17 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.83■■□□□ 1.41
RNF139Q8WU17 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
RNF139Q8WU17 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
RNF139Q8WU17 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.83■■□□□ 1.41
RNF139Q8WU17 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.83■■□□□ 1.41
RNF139Q8WU17 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.83■■□□□ 1.4
RNF139Q8WU17 AC008406.3-201ENST00000620001 1374 ntBASIC23.82■■□□□ 1.4
RNF139Q8WU17 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.82■■□□□ 1.4
RNF139Q8WU17 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.82■■□□□ 1.4
RNF139Q8WU17 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
RNF139Q8WU17 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF139Q8WU17 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RNF139Q8WU17 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.82■■□□□ 1.4
RNF139Q8WU17 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
RNF139Q8WU17 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.81■■□□□ 1.4
RNF139Q8WU17 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms