Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRTM2Q8N967 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
LRTM2Q8N967 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.65■□□□□ 0.58
LRTM2Q8N967 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.65■□□□□ 0.58
LRTM2Q8N967 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRTM2Q8N967 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LRTM2Q8N967 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRTM2Q8N967 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRTM2Q8N967 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.65■□□□□ 0.58
LRTM2Q8N967 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.65■□□□□ 0.58
LRTM2Q8N967 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
LRTM2Q8N967 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LRTM2Q8N967 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LRTM2Q8N967 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
LRTM2Q8N967 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.64■□□□□ 0.57
LRTM2Q8N967 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRTM2Q8N967 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRTM2Q8N967 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
LRTM2Q8N967 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRTM2Q8N967 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRTM2Q8N967 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.64■□□□□ 0.57
LRTM2Q8N967 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.64■□□□□ 0.57
LRTM2Q8N967 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRTM2Q8N967 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRTM2Q8N967 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRTM2Q8N967 AC090877.2-201ENST00000558441 1738 ntBASIC18.63■□□□□ 0.57
LRTM2Q8N967 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRTM2Q8N967 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRTM2Q8N967 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
LRTM2Q8N967 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LRTM2Q8N967 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRTM2Q8N967 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRTM2Q8N967 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRTM2Q8N967 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRTM2Q8N967 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
LRTM2Q8N967 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.63■□□□□ 0.57
LRTM2Q8N967 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRTM2Q8N967 RPS2P35-201ENST00000443417 897 ntBASIC18.62■□□□□ 0.57
LRTM2Q8N967 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.62■□□□□ 0.57
LRTM2Q8N967 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRTM2Q8N967 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.62■□□□□ 0.57
LRTM2Q8N967 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.62■□□□□ 0.57
LRTM2Q8N967 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRTM2Q8N967 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRTM2Q8N967 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.62■□□□□ 0.57
LRTM2Q8N967 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.62■□□□□ 0.57
LRTM2Q8N967 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRTM2Q8N967 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRTM2Q8N967 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRTM2Q8N967 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRTM2Q8N967 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.61■□□□□ 0.57
LRTM2Q8N967 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LRTM2Q8N967 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
LRTM2Q8N967 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRTM2Q8N967 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LRTM2Q8N967 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC18.61■□□□□ 0.57
LRTM2Q8N967 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.61■□□□□ 0.57
LRTM2Q8N967 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LRTM2Q8N967 RAP2CP1-202ENST00000605179 643 ntBASIC18.61■□□□□ 0.57
LRTM2Q8N967 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRTM2Q8N967 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRTM2Q8N967 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRTM2Q8N967 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRTM2Q8N967 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LRTM2Q8N967 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRTM2Q8N967 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRTM2Q8N967 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
LRTM2Q8N967 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.6■□□□□ 0.57
LRTM2Q8N967 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
LRTM2Q8N967 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRTM2Q8N967 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LRTM2Q8N967 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRTM2Q8N967 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRTM2Q8N967 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.59■□□□□ 0.57
LRTM2Q8N967 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.59■□□□□ 0.57
LRTM2Q8N967 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRTM2Q8N967 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRTM2Q8N967 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
LRTM2Q8N967 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.58■□□□□ 0.57
LRTM2Q8N967 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LRTM2Q8N967 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
LRTM2Q8N967 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
LRTM2Q8N967 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.58■□□□□ 0.57
LRTM2Q8N967 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
LRTM2Q8N967 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
LRTM2Q8N967 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRTM2Q8N967 AC026202.3-201ENST00000600805 1127 ntBASIC18.58■□□□□ 0.56
LRTM2Q8N967 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRTM2Q8N967 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
LRTM2Q8N967 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
LRTM2Q8N967 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
LRTM2Q8N967 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRTM2Q8N967 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRTM2Q8N967 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRTM2Q8N967 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRTM2Q8N967 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRTM2Q8N967 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRTM2Q8N967 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LRTM2Q8N967 AC007029.1-201ENST00000604183 313 ntBASIC18.57■□□□□ 0.56
LRTM2Q8N967 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms