Protein–RNA interactions for Protein: Q8N8D7

NKAIN3, Sodium/potassium-transporting ATPase subunit beta-1-interacting protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKAIN3Q8N8D7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NKAIN3Q8N8D7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKAIN3Q8N8D7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKAIN3Q8N8D7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NKAIN3Q8N8D7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKAIN3Q8N8D7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKAIN3Q8N8D7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NKAIN3Q8N8D7 MIR4449-201ENST00000578365 66 ntBASIC19.66■□□□□ 0.74
NKAIN3Q8N8D7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.66■□□□□ 0.74
NKAIN3Q8N8D7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NKAIN3Q8N8D7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NKAIN3Q8N8D7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NKAIN3Q8N8D7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
NKAIN3Q8N8D7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NKAIN3Q8N8D7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.65■□□□□ 0.74
NKAIN3Q8N8D7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.65■□□□□ 0.74
NKAIN3Q8N8D7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.65■□□□□ 0.74
NKAIN3Q8N8D7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NKAIN3Q8N8D7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NKAIN3Q8N8D7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NKAIN3Q8N8D7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.65■□□□□ 0.74
NKAIN3Q8N8D7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NKAIN3Q8N8D7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NKAIN3Q8N8D7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NKAIN3Q8N8D7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NKAIN3Q8N8D7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
NKAIN3Q8N8D7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NKAIN3Q8N8D7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NKAIN3Q8N8D7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKAIN3Q8N8D7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKAIN3Q8N8D7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKAIN3Q8N8D7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKAIN3Q8N8D7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
NKAIN3Q8N8D7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKAIN3Q8N8D7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NKAIN3Q8N8D7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.63■□□□□ 0.73
NKAIN3Q8N8D7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NKAIN3Q8N8D7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKAIN3Q8N8D7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKAIN3Q8N8D7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NKAIN3Q8N8D7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKAIN3Q8N8D7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKAIN3Q8N8D7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.62■□□□□ 0.73
NKAIN3Q8N8D7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKAIN3Q8N8D7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKAIN3Q8N8D7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
NKAIN3Q8N8D7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.62■□□□□ 0.73
NKAIN3Q8N8D7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.62■□□□□ 0.73
NKAIN3Q8N8D7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKAIN3Q8N8D7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NKAIN3Q8N8D7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKAIN3Q8N8D7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKAIN3Q8N8D7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKAIN3Q8N8D7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKAIN3Q8N8D7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKAIN3Q8N8D7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NKAIN3Q8N8D7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
NKAIN3Q8N8D7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.61■□□□□ 0.73
NKAIN3Q8N8D7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.61■□□□□ 0.73
NKAIN3Q8N8D7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NKAIN3Q8N8D7 MIR6765-201ENST00000614092 87 ntBASIC19.61■□□□□ 0.73
NKAIN3Q8N8D7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NKAIN3Q8N8D7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
NKAIN3Q8N8D7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKAIN3Q8N8D7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.61■□□□□ 0.73
NKAIN3Q8N8D7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKAIN3Q8N8D7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NKAIN3Q8N8D7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
NKAIN3Q8N8D7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NKAIN3Q8N8D7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.6■□□□□ 0.73
NKAIN3Q8N8D7 AC011551.1-201ENST00000614101 683 ntBASIC19.6■□□□□ 0.73
NKAIN3Q8N8D7 C1orf229-201ENST00000623686 2258 ntBASIC19.6■□□□□ 0.73
NKAIN3Q8N8D7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
NKAIN3Q8N8D7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NKAIN3Q8N8D7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
NKAIN3Q8N8D7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NKAIN3Q8N8D7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.59■□□□□ 0.73
NKAIN3Q8N8D7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NKAIN3Q8N8D7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NKAIN3Q8N8D7 RNF126P1-201ENST00000567452 1320 ntBASIC19.59■□□□□ 0.73
NKAIN3Q8N8D7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
NKAIN3Q8N8D7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.59■□□□□ 0.73
NKAIN3Q8N8D7 AL592293.1-201ENST00000502889 1188 ntBASIC19.59■□□□□ 0.73
NKAIN3Q8N8D7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NKAIN3Q8N8D7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.59■□□□□ 0.73
NKAIN3Q8N8D7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
NKAIN3Q8N8D7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
NKAIN3Q8N8D7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NKAIN3Q8N8D7 ALDH1A3-203ENST00000557963 1670 ntBASIC19.59■□□□□ 0.73
NKAIN3Q8N8D7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
NKAIN3Q8N8D7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
NKAIN3Q8N8D7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
NKAIN3Q8N8D7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NKAIN3Q8N8D7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NKAIN3Q8N8D7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
NKAIN3Q8N8D7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NKAIN3Q8N8D7 SPCS2P3-201ENST00000500401 656 ntBASIC19.58■□□□□ 0.72
NKAIN3Q8N8D7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
NKAIN3Q8N8D7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.58■□□□□ 0.72
NKAIN3Q8N8D7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 330.7 ms