Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.81■□□□□ 0.92
ZNF440Q8IYI8 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.81■□□□□ 0.92
ZNF440Q8IYI8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.81■□□□□ 0.92
ZNF440Q8IYI8 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF440Q8IYI8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF440Q8IYI8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF440Q8IYI8 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF440Q8IYI8 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF440Q8IYI8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF440Q8IYI8 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ZNF440Q8IYI8 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF440Q8IYI8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF440Q8IYI8 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF440Q8IYI8 BX664725.1-201ENST00000438252 379 ntBASIC20.8■□□□□ 0.92
ZNF440Q8IYI8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
ZNF440Q8IYI8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF440Q8IYI8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF440Q8IYI8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.8■□□□□ 0.92
ZNF440Q8IYI8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF440Q8IYI8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF440Q8IYI8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF440Q8IYI8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ZNF440Q8IYI8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF440Q8IYI8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.79■□□□□ 0.92
ZNF440Q8IYI8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.79■□□□□ 0.92
ZNF440Q8IYI8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.79■□□□□ 0.92
ZNF440Q8IYI8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.79■□□□□ 0.92
ZNF440Q8IYI8 SNX5-217ENST00000606557 1087 ntBASIC20.79■□□□□ 0.92
ZNF440Q8IYI8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ZNF440Q8IYI8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ZNF440Q8IYI8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF440Q8IYI8 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.79■□□□□ 0.92
ZNF440Q8IYI8 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF440Q8IYI8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.78■□□□□ 0.92
ZNF440Q8IYI8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF440Q8IYI8 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF440Q8IYI8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ZNF440Q8IYI8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.78■□□□□ 0.92
ZNF440Q8IYI8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ZNF440Q8IYI8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF440Q8IYI8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF440Q8IYI8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF440Q8IYI8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF440Q8IYI8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.77■□□□□ 0.92
ZNF440Q8IYI8 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF440Q8IYI8 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.77■□□□□ 0.92
ZNF440Q8IYI8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF440Q8IYI8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF440Q8IYI8 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF440Q8IYI8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.77■□□□□ 0.92
ZNF440Q8IYI8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF440Q8IYI8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ZNF440Q8IYI8 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF440Q8IYI8 AC021242.3-201ENST00000607598 1377 ntBASIC20.76■□□□□ 0.91
ZNF440Q8IYI8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF440Q8IYI8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
ZNF440Q8IYI8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.76■□□□□ 0.91
ZNF440Q8IYI8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.76■□□□□ 0.91
ZNF440Q8IYI8 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.76■□□□□ 0.91
ZNF440Q8IYI8 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF440Q8IYI8 ANOS2P-203ENST00000472227 1816 ntBASIC20.76■□□□□ 0.91
ZNF440Q8IYI8 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF440Q8IYI8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF440Q8IYI8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.75■□□□□ 0.91
ZNF440Q8IYI8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.75■□□□□ 0.91
ZNF440Q8IYI8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF440Q8IYI8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ZNF440Q8IYI8 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF440Q8IYI8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ZNF440Q8IYI8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.75■□□□□ 0.91
ZNF440Q8IYI8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.75■□□□□ 0.91
ZNF440Q8IYI8 AC092068.2-201ENST00000590491 1708 ntBASIC20.75■□□□□ 0.91
ZNF440Q8IYI8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF440Q8IYI8 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF440Q8IYI8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF440Q8IYI8 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF440Q8IYI8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.74■□□□□ 0.91
ZNF440Q8IYI8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF440Q8IYI8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.74■□□□□ 0.91
ZNF440Q8IYI8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF440Q8IYI8 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.74■□□□□ 0.91
ZNF440Q8IYI8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ZNF440Q8IYI8 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF440Q8IYI8 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.73■□□□□ 0.91
ZNF440Q8IYI8 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.73■□□□□ 0.91
ZNF440Q8IYI8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF440Q8IYI8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF440Q8IYI8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF440Q8IYI8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF440Q8IYI8 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ZNF440Q8IYI8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF440Q8IYI8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF440Q8IYI8 Z92544.1-202ENST00000571933 1220 ntBASIC20.73■□□□□ 0.91
ZNF440Q8IYI8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.73■□□□□ 0.91
ZNF440Q8IYI8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.73■□□□□ 0.91
ZNF440Q8IYI8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
ZNF440Q8IYI8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.73■□□□□ 0.91
ZNF440Q8IYI8 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF440Q8IYI8 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF440Q8IYI8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms