Protein–RNA interactions for Protein: Q86VW2

ARHGEF25, Rho guanine nucleotide exchange factor 25, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF25Q86VW2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
ARHGEF25Q86VW2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC30.72■■■□□ 2.51
ARHGEF25Q86VW2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
ARHGEF25Q86VW2 AC009086.3-201ENST00000623486 1008 ntBASIC30.71■■■□□ 2.51
ARHGEF25Q86VW2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
ARHGEF25Q86VW2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
ARHGEF25Q86VW2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
ARHGEF25Q86VW2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
ARHGEF25Q86VW2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
ARHGEF25Q86VW2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
ARHGEF25Q86VW2 SP2-202ENST00000613139 908 ntTSL 5 BASIC30.7■■■□□ 2.51
ARHGEF25Q86VW2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC30.7■■■□□ 2.51
ARHGEF25Q86VW2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC30.7■■■□□ 2.5
ARHGEF25Q86VW2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC30.69■■■□□ 2.5
ARHGEF25Q86VW2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC30.69■■■□□ 2.5
ARHGEF25Q86VW2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
ARHGEF25Q86VW2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC30.69■■■□□ 2.5
ARHGEF25Q86VW2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC30.69■■■□□ 2.5
ARHGEF25Q86VW2 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
ARHGEF25Q86VW2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
ARHGEF25Q86VW2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
ARHGEF25Q86VW2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC30.68■■■□□ 2.5
ARHGEF25Q86VW2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
ARHGEF25Q86VW2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
ARHGEF25Q86VW2 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
ARHGEF25Q86VW2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC30.68■■■□□ 2.5
ARHGEF25Q86VW2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
ARHGEF25Q86VW2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC30.67■■■□□ 2.5
ARHGEF25Q86VW2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
ARHGEF25Q86VW2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
ARHGEF25Q86VW2 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
ARHGEF25Q86VW2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC30.66■■■□□ 2.5
ARHGEF25Q86VW2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC30.66■■■□□ 2.5
ARHGEF25Q86VW2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
ARHGEF25Q86VW2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC30.65■■■□□ 2.5
ARHGEF25Q86VW2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
ARHGEF25Q86VW2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ARHGEF25Q86VW2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC30.65■■■□□ 2.5
ARHGEF25Q86VW2 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
ARHGEF25Q86VW2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
ARHGEF25Q86VW2 GRAMD4P2-201ENST00000423297 1097 ntBASIC30.64■■■□□ 2.5
ARHGEF25Q86VW2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC30.64■■■□□ 2.5
ARHGEF25Q86VW2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC30.64■■■□□ 2.5
ARHGEF25Q86VW2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
ARHGEF25Q86VW2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC30.64■■■□□ 2.49
ARHGEF25Q86VW2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC30.63■■■□□ 2.49
ARHGEF25Q86VW2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC30.63■■■□□ 2.49
ARHGEF25Q86VW2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC30.63■■■□□ 2.49
ARHGEF25Q86VW2 AK1-201ENST00000223836 736 ntTSL 3 BASIC30.63■■■□□ 2.49
ARHGEF25Q86VW2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
ARHGEF25Q86VW2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
ARHGEF25Q86VW2 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
ARHGEF25Q86VW2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
ARHGEF25Q86VW2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC30.63■■■□□ 2.49
ARHGEF25Q86VW2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC30.63■■■□□ 2.49
ARHGEF25Q86VW2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
ARHGEF25Q86VW2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
ARHGEF25Q86VW2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
ARHGEF25Q86VW2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
ARHGEF25Q86VW2 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
ARHGEF25Q86VW2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
ARHGEF25Q86VW2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
ARHGEF25Q86VW2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
ARHGEF25Q86VW2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
ARHGEF25Q86VW2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
ARHGEF25Q86VW2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC30.61■■■□□ 2.49
ARHGEF25Q86VW2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC30.61■■■□□ 2.49
ARHGEF25Q86VW2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC30.61■■■□□ 2.49
ARHGEF25Q86VW2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
ARHGEF25Q86VW2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
ARHGEF25Q86VW2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC30.61■■■□□ 2.49
ARHGEF25Q86VW2 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
ARHGEF25Q86VW2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
ARHGEF25Q86VW2 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
ARHGEF25Q86VW2 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
ARHGEF25Q86VW2 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
ARHGEF25Q86VW2 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
ARHGEF25Q86VW2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
ARHGEF25Q86VW2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
ARHGEF25Q86VW2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC30.6■■■□□ 2.49
ARHGEF25Q86VW2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
ARHGEF25Q86VW2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
ARHGEF25Q86VW2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC30.6■■■□□ 2.49
ARHGEF25Q86VW2 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
ARHGEF25Q86VW2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
ARHGEF25Q86VW2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC30.59■■■□□ 2.49
ARHGEF25Q86VW2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
ARHGEF25Q86VW2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC30.59■■■□□ 2.49
ARHGEF25Q86VW2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC30.59■■■□□ 2.49
ARHGEF25Q86VW2 AL031602.1-201ENST00000633169 911 ntBASIC30.59■■■□□ 2.49
ARHGEF25Q86VW2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
ARHGEF25Q86VW2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC30.59■■■□□ 2.49
ARHGEF25Q86VW2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
ARHGEF25Q86VW2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC30.58■■■□□ 2.49
ARHGEF25Q86VW2 AL161729.1-201ENST00000604104 1402 ntBASIC30.58■■■□□ 2.49
ARHGEF25Q86VW2 AC034268.1-201ENST00000441047 882 ntBASIC30.58■■■□□ 2.49
ARHGEF25Q86VW2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC30.58■■■□□ 2.49
ARHGEF25Q86VW2 pRNA.6-201ENST00000610482 90 ntBASIC30.58■■■□□ 2.49
ARHGEF25Q86VW2 pRNA.5-201ENST00000612139 90 ntBASIC30.58■■■□□ 2.49
ARHGEF25Q86VW2 pRNA.11-201ENST00000618423 90 ntBASIC30.58■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms