Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSMD3Q7Z407 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CSMD3Q7Z407 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
CSMD3Q7Z407 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSMD3Q7Z407 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CSMD3Q7Z407 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.07■□□□□ 0.16
CSMD3Q7Z407 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSMD3Q7Z407 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.07■□□□□ 0.16
CSMD3Q7Z407 SHF-208ENST00000560734 1731 ntTSL 3 BASIC16.07■□□□□ 0.16
CSMD3Q7Z407 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC16.07■□□□□ 0.16
CSMD3Q7Z407 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSMD3Q7Z407 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.07■□□□□ 0.16
CSMD3Q7Z407 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSMD3Q7Z407 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC16.06■□□□□ 0.16
CSMD3Q7Z407 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.06■□□□□ 0.16
CSMD3Q7Z407 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CSMD3Q7Z407 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC16.06■□□□□ 0.16
CSMD3Q7Z407 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.06■□□□□ 0.16
CSMD3Q7Z407 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.06■□□□□ 0.16
CSMD3Q7Z407 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.06■□□□□ 0.16
CSMD3Q7Z407 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSMD3Q7Z407 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSMD3Q7Z407 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSMD3Q7Z407 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.05■□□□□ 0.16
CSMD3Q7Z407 KRT18P61-201ENST00000585825 1298 ntBASIC16.05■□□□□ 0.16
CSMD3Q7Z407 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.05■□□□□ 0.16
CSMD3Q7Z407 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CSMD3Q7Z407 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSMD3Q7Z407 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CSMD3Q7Z407 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSMD3Q7Z407 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.05■□□□□ 0.16
CSMD3Q7Z407 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSMD3Q7Z407 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.05■□□□□ 0.16
CSMD3Q7Z407 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSMD3Q7Z407 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD3Q7Z407 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.04■□□□□ 0.16
CSMD3Q7Z407 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD3Q7Z407 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CSMD3Q7Z407 KRT18P14-201ENST00000534205 1250 ntBASIC16.04■□□□□ 0.16
CSMD3Q7Z407 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.04■□□□□ 0.16
CSMD3Q7Z407 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD3Q7Z407 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD3Q7Z407 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD3Q7Z407 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD3Q7Z407 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.04■□□□□ 0.16
CSMD3Q7Z407 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD3Q7Z407 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSMD3Q7Z407 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16.03■□□□□ 0.16
CSMD3Q7Z407 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSMD3Q7Z407 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSMD3Q7Z407 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSMD3Q7Z407 HES6-206ENST00000409574 738 ntTSL 2 BASIC16.03■□□□□ 0.16
CSMD3Q7Z407 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CSMD3Q7Z407 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC16.03■□□□□ 0.16
CSMD3Q7Z407 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.03■□□□□ 0.16
CSMD3Q7Z407 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSMD3Q7Z407 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSMD3Q7Z407 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSMD3Q7Z407 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.03■□□□□ 0.16
CSMD3Q7Z407 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.03■□□□□ 0.16
CSMD3Q7Z407 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CSMD3Q7Z407 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSMD3Q7Z407 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSMD3Q7Z407 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CSMD3Q7Z407 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSMD3Q7Z407 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CSMD3Q7Z407 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.02■□□□□ 0.15
CSMD3Q7Z407 CCDC92B-201ENST00000575506 885 ntBASIC16.02■□□□□ 0.15
CSMD3Q7Z407 AC104771.1-201ENST00000603335 964 ntBASIC16.02■□□□□ 0.15
CSMD3Q7Z407 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.02■□□□□ 0.15
CSMD3Q7Z407 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSMD3Q7Z407 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CSMD3Q7Z407 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CSMD3Q7Z407 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CSMD3Q7Z407 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CSMD3Q7Z407 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CSMD3Q7Z407 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CSMD3Q7Z407 AC006015.1-201ENST00000429970 570 ntBASIC16.01■□□□□ 0.15
CSMD3Q7Z407 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CSMD3Q7Z407 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CSMD3Q7Z407 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.01■□□□□ 0.15
CSMD3Q7Z407 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16■□□□□ 0.15
CSMD3Q7Z407 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC16■□□□□ 0.15
CSMD3Q7Z407 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CSMD3Q7Z407 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16■□□□□ 0.15
CSMD3Q7Z407 CDCA4P2-201ENST00000441182 718 ntBASIC16■□□□□ 0.15
CSMD3Q7Z407 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16■□□□□ 0.15
CSMD3Q7Z407 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CSMD3Q7Z407 MIR3181-201ENST00000578512 73 ntBASIC16■□□□□ 0.15
CSMD3Q7Z407 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CSMD3Q7Z407 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CSMD3Q7Z407 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CSMD3Q7Z407 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CSMD3Q7Z407 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC16■□□□□ 0.15
CSMD3Q7Z407 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CSMD3Q7Z407 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC15.99■□□□□ 0.15
CSMD3Q7Z407 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSMD3Q7Z407 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.99■□□□□ 0.15
CSMD3Q7Z407 GRAMD4P2-201ENST00000423297 1097 ntBASIC15.99■□□□□ 0.15
CSMD3Q7Z407 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms