Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CDCA8Q53HL2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC31.64■■■□□ 2.66
CDCA8Q53HL2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.66
CDCA8Q53HL2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CDCA8Q53HL2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC31.64■■■□□ 2.66
CDCA8Q53HL2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC31.64■■■□□ 2.65
CDCA8Q53HL2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC31.63■■■□□ 2.65
CDCA8Q53HL2 LINC01124-201ENST00000409786 2117 ntBASIC31.63■■■□□ 2.65
CDCA8Q53HL2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CDCA8Q53HL2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
CDCA8Q53HL2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC31.63■■■□□ 2.65
CDCA8Q53HL2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CDCA8Q53HL2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CDCA8Q53HL2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC31.62■■■□□ 2.65
CDCA8Q53HL2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC31.62■■■□□ 2.65
CDCA8Q53HL2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
CDCA8Q53HL2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
CDCA8Q53HL2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CDCA8Q53HL2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CDCA8Q53HL2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC31.62■■■□□ 2.65
CDCA8Q53HL2 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CDCA8Q53HL2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CDCA8Q53HL2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CDCA8Q53HL2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CDCA8Q53HL2 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CDCA8Q53HL2 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC31.6■■■□□ 2.65
CDCA8Q53HL2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC31.6■■■□□ 2.65
CDCA8Q53HL2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC31.6■■■□□ 2.65
CDCA8Q53HL2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC31.6■■■□□ 2.65
CDCA8Q53HL2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
CDCA8Q53HL2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC31.6■■■□□ 2.65
CDCA8Q53HL2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC31.6■■■□□ 2.65
CDCA8Q53HL2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CDCA8Q53HL2 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CDCA8Q53HL2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CDCA8Q53HL2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC31.59■■■□□ 2.65
CDCA8Q53HL2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CDCA8Q53HL2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC31.58■■■□□ 2.65
CDCA8Q53HL2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC31.58■■■□□ 2.65
CDCA8Q53HL2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
CDCA8Q53HL2 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CDCA8Q53HL2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
CDCA8Q53HL2 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CDCA8Q53HL2 SRD5A1P1-201ENST00000442297 786 ntBASIC31.57■■■□□ 2.64
CDCA8Q53HL2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC31.57■■■□□ 2.64
CDCA8Q53HL2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
CDCA8Q53HL2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC31.57■■■□□ 2.64
CDCA8Q53HL2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CDCA8Q53HL2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CDCA8Q53HL2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC31.56■■■□□ 2.64
CDCA8Q53HL2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CDCA8Q53HL2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
CDCA8Q53HL2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
CDCA8Q53HL2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC31.56■■■□□ 2.64
CDCA8Q53HL2 AC009102.2-201ENST00000606772 1639 ntBASIC31.56■■■□□ 2.64
CDCA8Q53HL2 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC31.56■■■□□ 2.64
CDCA8Q53HL2 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
CDCA8Q53HL2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC31.55■■■□□ 2.64
CDCA8Q53HL2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CDCA8Q53HL2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC31.55■■■□□ 2.64
CDCA8Q53HL2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC31.55■■■□□ 2.64
CDCA8Q53HL2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
CDCA8Q53HL2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CDCA8Q53HL2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CDCA8Q53HL2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
CDCA8Q53HL2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC31.54■■■□□ 2.64
CDCA8Q53HL2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC31.54■■■□□ 2.64
CDCA8Q53HL2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
CDCA8Q53HL2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CDCA8Q53HL2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC31.53■■■□□ 2.64
CDCA8Q53HL2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CDCA8Q53HL2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CDCA8Q53HL2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC31.52■■■□□ 2.64
CDCA8Q53HL2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
CDCA8Q53HL2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
CDCA8Q53HL2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC31.52■■■□□ 2.64
CDCA8Q53HL2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC31.52■■■□□ 2.64
CDCA8Q53HL2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC31.52■■■□□ 2.64
CDCA8Q53HL2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
CDCA8Q53HL2 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CDCA8Q53HL2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC31.51■■■□□ 2.63
CDCA8Q53HL2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC31.5■■■□□ 2.63
CDCA8Q53HL2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
CDCA8Q53HL2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC31.5■■■□□ 2.63
CDCA8Q53HL2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC31.5■■■□□ 2.63
CDCA8Q53HL2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
CDCA8Q53HL2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
CDCA8Q53HL2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CDCA8Q53HL2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CDCA8Q53HL2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC31.5■■■□□ 2.63
CDCA8Q53HL2 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC31.5■■■□□ 2.63
CDCA8Q53HL2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC31.49■■■□□ 2.63
CDCA8Q53HL2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
CDCA8Q53HL2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC31.49■■■□□ 2.63
CDCA8Q53HL2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC31.49■■■□□ 2.63
CDCA8Q53HL2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
CDCA8Q53HL2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC31.49■■■□□ 2.63
CDCA8Q53HL2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
CDCA8Q53HL2 C17orf82-201ENST00000623772 1530 ntBASIC31.49■■■□□ 2.63
CDCA8Q53HL2 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms