Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.29■■□□□ 1
PRICKLE4Q2TBC4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PRICKLE4Q2TBC4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PRICKLE4Q2TBC4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.29■■□□□ 1
PRICKLE4Q2TBC4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PRICKLE4Q2TBC4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.28■■□□□ 1
PRICKLE4Q2TBC4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRICKLE4Q2TBC4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.28■■□□□ 1
PRICKLE4Q2TBC4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
PRICKLE4Q2TBC4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.28■■□□□ 1
PRICKLE4Q2TBC4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.28■■□□□ 1
PRICKLE4Q2TBC4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
PRICKLE4Q2TBC4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
PRICKLE4Q2TBC4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRICKLE4Q2TBC4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.28■■□□□ 1
PRICKLE4Q2TBC4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PRICKLE4Q2TBC4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
PRICKLE4Q2TBC4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.27■■□□□ 1
PRICKLE4Q2TBC4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PRICKLE4Q2TBC4 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.27■■□□□ 1
PRICKLE4Q2TBC4 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.27■■□□□ 1
PRICKLE4Q2TBC4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRICKLE4Q2TBC4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.27■■□□□ 1
PRICKLE4Q2TBC4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRICKLE4Q2TBC4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRICKLE4Q2TBC4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRICKLE4Q2TBC4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRICKLE4Q2TBC4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRICKLE4Q2TBC4 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.27■■□□□ 1
PRICKLE4Q2TBC4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
PRICKLE4Q2TBC4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRICKLE4Q2TBC4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.27■■□□□ 1
PRICKLE4Q2TBC4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
PRICKLE4Q2TBC4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PRICKLE4Q2TBC4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRICKLE4Q2TBC4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRICKLE4Q2TBC4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PRICKLE4Q2TBC4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRICKLE4Q2TBC4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.26■□□□□ 0.99
PRICKLE4Q2TBC4 GUSBP5-201ENST00000418136 578 ntBASIC21.26■□□□□ 0.99
PRICKLE4Q2TBC4 TSPY9P-201ENST00000440215 945 ntBASIC21.26■□□□□ 0.99
PRICKLE4Q2TBC4 TSPY11P-201ENST00000442607 1045 ntBASIC21.26■□□□□ 0.99
PRICKLE4Q2TBC4 MTDHP2-201ENST00000601468 714 ntBASIC21.26■□□□□ 0.99
PRICKLE4Q2TBC4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.26■□□□□ 0.99
PRICKLE4Q2TBC4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.26■□□□□ 0.99
PRICKLE4Q2TBC4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PRICKLE4Q2TBC4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRICKLE4Q2TBC4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PRICKLE4Q2TBC4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRICKLE4Q2TBC4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRICKLE4Q2TBC4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.25■□□□□ 0.99
PRICKLE4Q2TBC4 UNC93B8-201ENST00000511903 705 ntBASIC21.25■□□□□ 0.99
PRICKLE4Q2TBC4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PRICKLE4Q2TBC4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.25■□□□□ 0.99
PRICKLE4Q2TBC4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRICKLE4Q2TBC4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRICKLE4Q2TBC4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRICKLE4Q2TBC4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRICKLE4Q2TBC4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PRICKLE4Q2TBC4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.24■□□□□ 0.99
PRICKLE4Q2TBC4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.24■□□□□ 0.99
PRICKLE4Q2TBC4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.24■□□□□ 0.99
PRICKLE4Q2TBC4 AC010997.5-201ENST00000609182 354 ntBASIC21.24■□□□□ 0.99
PRICKLE4Q2TBC4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
PRICKLE4Q2TBC4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.23■□□□□ 0.99
PRICKLE4Q2TBC4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.23■□□□□ 0.99
PRICKLE4Q2TBC4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.23■□□□□ 0.99
PRICKLE4Q2TBC4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.23■□□□□ 0.99
PRICKLE4Q2TBC4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PRICKLE4Q2TBC4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
PRICKLE4Q2TBC4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PRICKLE4Q2TBC4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRICKLE4Q2TBC4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PRICKLE4Q2TBC4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRICKLE4Q2TBC4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRICKLE4Q2TBC4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PRICKLE4Q2TBC4 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.22■□□□□ 0.99
PRICKLE4Q2TBC4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRICKLE4Q2TBC4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PRICKLE4Q2TBC4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
PRICKLE4Q2TBC4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRICKLE4Q2TBC4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PRICKLE4Q2TBC4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.21■□□□□ 0.99
PRICKLE4Q2TBC4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PRICKLE4Q2TBC4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
PRICKLE4Q2TBC4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.21■□□□□ 0.99
PRICKLE4Q2TBC4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PRICKLE4Q2TBC4 AC005703.6-201ENST00000623265 1329 ntBASIC21.21■□□□□ 0.99
PRICKLE4Q2TBC4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRICKLE4Q2TBC4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.21■□□□□ 0.99
PRICKLE4Q2TBC4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PRICKLE4Q2TBC4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRICKLE4Q2TBC4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRICKLE4Q2TBC4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRICKLE4Q2TBC4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.2■□□□□ 0.98
PRICKLE4Q2TBC4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PRICKLE4Q2TBC4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.2■□□□□ 0.98
PRICKLE4Q2TBC4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRICKLE4Q2TBC4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.2■□□□□ 0.98
PRICKLE4Q2TBC4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms