Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIST1H3AP68431 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIST1H3AP68431 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIST1H3AP68431 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIST1H3AP68431 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.91■□□□□ 0.78
HIST1H3AP68431 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.91■□□□□ 0.78
HIST1H3AP68431 SNX5-217ENST00000606557 1087 ntBASIC19.91■□□□□ 0.78
HIST1H3AP68431 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.91■□□□□ 0.78
HIST1H3AP68431 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIST1H3AP68431 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIST1H3AP68431 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.91■□□□□ 0.78
HIST1H3AP68431 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HIST1H3AP68431 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIST1H3AP68431 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HIST1H3AP68431 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.91■□□□□ 0.78
HIST1H3AP68431 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HIST1H3AP68431 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
HIST1H3AP68431 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.9■□□□□ 0.78
HIST1H3AP68431 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
HIST1H3AP68431 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.9■□□□□ 0.78
HIST1H3AP68431 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
HIST1H3AP68431 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HIST1H3AP68431 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIST1H3AP68431 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.9■□□□□ 0.78
HIST1H3AP68431 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIST1H3AP68431 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.9■□□□□ 0.78
HIST1H3AP68431 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.9■□□□□ 0.78
HIST1H3AP68431 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HIST1H3AP68431 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HIST1H3AP68431 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.89■□□□□ 0.77
HIST1H3AP68431 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.89■□□□□ 0.77
HIST1H3AP68431 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HIST1H3AP68431 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.89■□□□□ 0.77
HIST1H3AP68431 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.89■□□□□ 0.77
HIST1H3AP68431 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HIST1H3AP68431 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HIST1H3AP68431 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIST1H3AP68431 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HIST1H3AP68431 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIST1H3AP68431 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIST1H3AP68431 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
HIST1H3AP68431 ANOS2P-203ENST00000472227 1816 ntBASIC19.88■□□□□ 0.77
HIST1H3AP68431 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
HIST1H3AP68431 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIST1H3AP68431 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIST1H3AP68431 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIST1H3AP68431 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
HIST1H3AP68431 AC021242.3-201ENST00000607598 1377 ntBASIC19.88■□□□□ 0.77
HIST1H3AP68431 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIST1H3AP68431 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.88■□□□□ 0.77
HIST1H3AP68431 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.88■□□□□ 0.77
HIST1H3AP68431 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HIST1H3AP68431 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HIST1H3AP68431 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.88■□□□□ 0.77
HIST1H3AP68431 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.88■□□□□ 0.77
HIST1H3AP68431 AC092068.2-201ENST00000590491 1708 ntBASIC19.88■□□□□ 0.77
HIST1H3AP68431 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIST1H3AP68431 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
HIST1H3AP68431 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.87■□□□□ 0.77
HIST1H3AP68431 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HIST1H3AP68431 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIST1H3AP68431 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HIST1H3AP68431 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.87■□□□□ 0.77
HIST1H3AP68431 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.87■□□□□ 0.77
HIST1H3AP68431 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.87■□□□□ 0.77
HIST1H3AP68431 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.87■□□□□ 0.77
HIST1H3AP68431 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HIST1H3AP68431 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.87■□□□□ 0.77
HIST1H3AP68431 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
HIST1H3AP68431 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HIST1H3AP68431 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HIST1H3AP68431 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.86■□□□□ 0.77
HIST1H3AP68431 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HIST1H3AP68431 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.86■□□□□ 0.77
HIST1H3AP68431 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
HIST1H3AP68431 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.86■□□□□ 0.77
HIST1H3AP68431 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.86■□□□□ 0.77
HIST1H3AP68431 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
HIST1H3AP68431 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.86■□□□□ 0.77
HIST1H3AP68431 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
HIST1H3AP68431 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.86■□□□□ 0.77
HIST1H3AP68431 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
HIST1H3AP68431 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
HIST1H3AP68431 RARRES2P1-201ENST00000474487 481 ntBASIC19.85■□□□□ 0.77
HIST1H3AP68431 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.85■□□□□ 0.77
HIST1H3AP68431 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.85■□□□□ 0.77
HIST1H3AP68431 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HIST1H3AP68431 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HIST1H3AP68431 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HIST1H3AP68431 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.85■□□□□ 0.77
HIST1H3AP68431 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HIST1H3AP68431 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HIST1H3AP68431 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
HIST1H3AP68431 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HIST1H3AP68431 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HIST1H3AP68431 BX664725.1-201ENST00000438252 379 ntBASIC19.84■□□□□ 0.77
HIST1H3AP68431 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.84■□□□□ 0.77
HIST1H3AP68431 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HIST1H3AP68431 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HIST1H3AP68431 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms