Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20■□□□□ 0.79
LSM6P62312 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20■□□□□ 0.79
LSM6P62312 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
LSM6P62312 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
LSM6P62312 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LSM6P62312 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LSM6P62312 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSM6P62312 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSM6P62312 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSM6P62312 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
LSM6P62312 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSM6P62312 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSM6P62312 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.99■□□□□ 0.79
LSM6P62312 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.99■□□□□ 0.79
LSM6P62312 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.99■□□□□ 0.79
LSM6P62312 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.99■□□□□ 0.79
LSM6P62312 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
LSM6P62312 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.99■□□□□ 0.79
LSM6P62312 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSM6P62312 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.99■□□□□ 0.79
LSM6P62312 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSM6P62312 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSM6P62312 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LSM6P62312 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LSM6P62312 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LSM6P62312 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LSM6P62312 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LSM6P62312 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
LSM6P62312 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.98■□□□□ 0.79
LSM6P62312 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
LSM6P62312 SNX5-217ENST00000606557 1087 ntBASIC19.98■□□□□ 0.79
LSM6P62312 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LSM6P62312 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.98■□□□□ 0.79
LSM6P62312 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LSM6P62312 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LSM6P62312 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
LSM6P62312 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LSM6P62312 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LSM6P62312 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
LSM6P62312 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LSM6P62312 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
LSM6P62312 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LSM6P62312 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.97■□□□□ 0.79
LSM6P62312 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LSM6P62312 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LSM6P62312 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.97■□□□□ 0.79
LSM6P62312 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
LSM6P62312 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSM6P62312 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSM6P62312 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LSM6P62312 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.96■□□□□ 0.79
LSM6P62312 BX664725.1-201ENST00000438252 379 ntBASIC19.96■□□□□ 0.79
LSM6P62312 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.96■□□□□ 0.79
LSM6P62312 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.96■□□□□ 0.79
LSM6P62312 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.96■□□□□ 0.79
LSM6P62312 ANOS2P-203ENST00000472227 1816 ntBASIC19.96■□□□□ 0.79
LSM6P62312 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSM6P62312 AC092068.2-201ENST00000590491 1708 ntBASIC19.96■□□□□ 0.79
LSM6P62312 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LSM6P62312 AC021242.3-201ENST00000607598 1377 ntBASIC19.95■□□□□ 0.79
LSM6P62312 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LSM6P62312 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LSM6P62312 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LSM6P62312 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.95■□□□□ 0.78
LSM6P62312 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.95■□□□□ 0.78
LSM6P62312 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LSM6P62312 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.95■□□□□ 0.78
LSM6P62312 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.95■□□□□ 0.78
LSM6P62312 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LSM6P62312 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LSM6P62312 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.94■□□□□ 0.78
LSM6P62312 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
LSM6P62312 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSM6P62312 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LSM6P62312 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.94■□□□□ 0.78
LSM6P62312 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.94■□□□□ 0.78
LSM6P62312 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.94■□□□□ 0.78
LSM6P62312 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
LSM6P62312 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.94■□□□□ 0.78
LSM6P62312 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSM6P62312 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.94■□□□□ 0.78
LSM6P62312 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LSM6P62312 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.94■□□□□ 0.78
LSM6P62312 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.94■□□□□ 0.78
LSM6P62312 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.94■□□□□ 0.78
LSM6P62312 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSM6P62312 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LSM6P62312 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LSM6P62312 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LSM6P62312 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LSM6P62312 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
LSM6P62312 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LSM6P62312 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.93■□□□□ 0.78
LSM6P62312 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.93■□□□□ 0.78
LSM6P62312 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LSM6P62312 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.93■□□□□ 0.78
LSM6P62312 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.93■□□□□ 0.78
LSM6P62312 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LSM6P62312 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.93■□□□□ 0.78
LSM6P62312 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms