Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SEC61A1P61619 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SEC61A1P61619 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SEC61A1P61619 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SEC61A1P61619 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SEC61A1P61619 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SEC61A1P61619 AC141586.4-201ENST00000624558 1573 ntBASIC19.76■□□□□ 0.75
SEC61A1P61619 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SEC61A1P61619 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.76■□□□□ 0.75
SEC61A1P61619 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.76■□□□□ 0.75
SEC61A1P61619 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEC61A1P61619 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEC61A1P61619 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.76■□□□□ 0.75
SEC61A1P61619 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SEC61A1P61619 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.75■□□□□ 0.75
SEC61A1P61619 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.75■□□□□ 0.75
SEC61A1P61619 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.75■□□□□ 0.75
SEC61A1P61619 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SEC61A1P61619 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEC61A1P61619 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEC61A1P61619 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEC61A1P61619 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.74■□□□□ 0.75
SEC61A1P61619 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEC61A1P61619 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.74■□□□□ 0.75
SEC61A1P61619 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
SEC61A1P61619 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEC61A1P61619 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SEC61A1P61619 AL024507.2-201ENST00000606070 2574 ntBASIC19.73■□□□□ 0.75
SEC61A1P61619 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.73■□□□□ 0.75
SEC61A1P61619 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.73■□□□□ 0.75
SEC61A1P61619 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SEC61A1P61619 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
SEC61A1P61619 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.73■□□□□ 0.75
SEC61A1P61619 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEC61A1P61619 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEC61A1P61619 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEC61A1P61619 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SEC61A1P61619 LINC00565-201ENST00000562710 2331 ntBASIC19.73■□□□□ 0.75
SEC61A1P61619 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SEC61A1P61619 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SEC61A1P61619 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.72■□□□□ 0.75
SEC61A1P61619 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.72■□□□□ 0.75
SEC61A1P61619 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SEC61A1P61619 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SEC61A1P61619 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.72■□□□□ 0.75
SEC61A1P61619 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SEC61A1P61619 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SEC61A1P61619 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEC61A1P61619 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.71■□□□□ 0.75
SEC61A1P61619 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.71■□□□□ 0.75
SEC61A1P61619 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SEC61A1P61619 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SEC61A1P61619 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEC61A1P61619 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SEC61A1P61619 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SEC61A1P61619 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
SEC61A1P61619 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SEC61A1P61619 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SEC61A1P61619 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SEC61A1P61619 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.7■□□□□ 0.74
SEC61A1P61619 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEC61A1P61619 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SEC61A1P61619 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SEC61A1P61619 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEC61A1P61619 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEC61A1P61619 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SEC61A1P61619 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEC61A1P61619 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
SEC61A1P61619 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEC61A1P61619 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.7■□□□□ 0.74
SEC61A1P61619 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEC61A1P61619 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SEC61A1P61619 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SEC61A1P61619 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SEC61A1P61619 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEC61A1P61619 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SEC61A1P61619 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SEC61A1P61619 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SEC61A1P61619 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEC61A1P61619 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SEC61A1P61619 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SEC61A1P61619 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEC61A1P61619 AC022616.5-201ENST00000518796 181 ntBASIC19.69■□□□□ 0.74
SEC61A1P61619 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SEC61A1P61619 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.69■□□□□ 0.74
SEC61A1P61619 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEC61A1P61619 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.69■□□□□ 0.74
SEC61A1P61619 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SEC61A1P61619 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SEC61A1P61619 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SEC61A1P61619 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.68■□□□□ 0.74
SEC61A1P61619 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEC61A1P61619 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.68■□□□□ 0.74
SEC61A1P61619 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SEC61A1P61619 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEC61A1P61619 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEC61A1P61619 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SEC61A1P61619 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SEC61A1P61619 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.68■□□□□ 0.74
SEC61A1P61619 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms