Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 AL136162.1-201ENST00000607711 1078 ntBASIC29.45■■■□□ 2.31
EIF4A1P60842 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
EIF4A1P60842 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
EIF4A1P60842 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC29.44■■■□□ 2.3
EIF4A1P60842 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC29.44■■■□□ 2.3
EIF4A1P60842 AL031432.3-201ENST00000607698 485 ntBASIC29.44■■■□□ 2.3
EIF4A1P60842 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
EIF4A1P60842 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
EIF4A1P60842 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
EIF4A1P60842 ALDH1A3-203ENST00000557963 1670 ntBASIC29.44■■■□□ 2.3
EIF4A1P60842 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
EIF4A1P60842 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
EIF4A1P60842 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
EIF4A1P60842 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
EIF4A1P60842 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC29.43■■■□□ 2.3
EIF4A1P60842 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
EIF4A1P60842 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
EIF4A1P60842 USF2-207ENST00000595068 1612 ntTSL 5 BASIC29.42■■■□□ 2.3
EIF4A1P60842 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
EIF4A1P60842 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
EIF4A1P60842 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC29.42■■■□□ 2.3
EIF4A1P60842 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC29.42■■■□□ 2.3
EIF4A1P60842 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC29.42■■■□□ 2.3
EIF4A1P60842 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC29.42■■■□□ 2.3
EIF4A1P60842 AC024257.2-201ENST00000549699 147 ntBASIC29.42■■■□□ 2.3
EIF4A1P60842 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC29.42■■■□□ 2.3
EIF4A1P60842 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC29.42■■■□□ 2.3
EIF4A1P60842 EI24-204ENST00000527235 1625 ntTSL 5 BASIC29.42■■■□□ 2.3
EIF4A1P60842 C17orf82-201ENST00000623772 1530 ntBASIC29.41■■■□□ 2.3
EIF4A1P60842 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC29.41■■■□□ 2.3
EIF4A1P60842 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
EIF4A1P60842 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
EIF4A1P60842 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
EIF4A1P60842 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC29.4■■■□□ 2.3
EIF4A1P60842 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC29.4■■■□□ 2.3
EIF4A1P60842 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
EIF4A1P60842 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
EIF4A1P60842 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC29.4■■■□□ 2.3
EIF4A1P60842 AC135279.3-201ENST00000610945 1311 ntBASIC29.4■■■□□ 2.3
EIF4A1P60842 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC29.39■■■□□ 2.3
EIF4A1P60842 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
EIF4A1P60842 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC29.39■■■□□ 2.3
EIF4A1P60842 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
EIF4A1P60842 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC29.39■■■□□ 2.3
EIF4A1P60842 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
EIF4A1P60842 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
EIF4A1P60842 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
EIF4A1P60842 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
EIF4A1P60842 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
EIF4A1P60842 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC29.38■■■□□ 2.29
EIF4A1P60842 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC29.38■■■□□ 2.29
EIF4A1P60842 AC099791.2-201ENST00000605725 427 ntBASIC29.38■■■□□ 2.29
EIF4A1P60842 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
EIF4A1P60842 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC29.38■■■□□ 2.29
EIF4A1P60842 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
EIF4A1P60842 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
EIF4A1P60842 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC29.37■■■□□ 2.29
EIF4A1P60842 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
EIF4A1P60842 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
EIF4A1P60842 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
EIF4A1P60842 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC29.37■■■□□ 2.29
EIF4A1P60842 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
EIF4A1P60842 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
EIF4A1P60842 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
EIF4A1P60842 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
EIF4A1P60842 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC29.36■■■□□ 2.29
EIF4A1P60842 SUDS3P1-201ENST00000505831 966 ntBASIC29.36■■■□□ 2.29
EIF4A1P60842 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
EIF4A1P60842 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
EIF4A1P60842 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
EIF4A1P60842 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
EIF4A1P60842 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC29.35■■■□□ 2.29
EIF4A1P60842 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC29.35■■■□□ 2.29
EIF4A1P60842 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
EIF4A1P60842 DUX4L19-201ENST00000557448 1267 ntBASIC29.35■■■□□ 2.29
EIF4A1P60842 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC29.35■■■□□ 2.29
EIF4A1P60842 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
EIF4A1P60842 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
EIF4A1P60842 SF1-220ENST00000626028 704 ntTSL 2 BASIC29.34■■■□□ 2.29
EIF4A1P60842 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
EIF4A1P60842 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
EIF4A1P60842 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
EIF4A1P60842 SERBP1P1-201ENST00000396021 1160 ntBASIC29.33■■■□□ 2.29
EIF4A1P60842 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
EIF4A1P60842 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC29.33■■■□□ 2.29
EIF4A1P60842 EED-207ENST00000528180 1745 ntTSL 5 BASIC29.33■■■□□ 2.29
EIF4A1P60842 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
EIF4A1P60842 SYT6-210ENST00000641643 1587 ntBASIC29.32■■■□□ 2.28
EIF4A1P60842 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
EIF4A1P60842 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
EIF4A1P60842 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC29.31■■■□□ 2.28
EIF4A1P60842 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
EIF4A1P60842 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
EIF4A1P60842 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC29.31■■■□□ 2.28
EIF4A1P60842 AC092171.4-201ENST00000609130 632 ntBASIC29.31■■■□□ 2.28
EIF4A1P60842 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC29.31■■■□□ 2.28
EIF4A1P60842 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
EIF4A1P60842 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC29.31■■■□□ 2.28
EIF4A1P60842 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC29.31■■■□□ 2.28
EIF4A1P60842 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms