Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.09■□□□□ 0.97
RNF144AP50876 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.09■□□□□ 0.97
RNF144AP50876 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
RNF144AP50876 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RNF144AP50876 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.09■□□□□ 0.97
RNF144AP50876 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.09■□□□□ 0.97
RNF144AP50876 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF144AP50876 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
RNF144AP50876 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF144AP50876 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF144AP50876 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RNF144AP50876 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.08■□□□□ 0.97
RNF144AP50876 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.08■□□□□ 0.97
RNF144AP50876 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.08■□□□□ 0.97
RNF144AP50876 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RNF144AP50876 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF144AP50876 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF144AP50876 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF144AP50876 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
RNF144AP50876 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.07■□□□□ 0.96
RNF144AP50876 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
RNF144AP50876 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF144AP50876 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF144AP50876 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF144AP50876 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF144AP50876 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF144AP50876 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF144AP50876 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF144AP50876 AL451085.2-201ENST00000605085 799 ntBASIC21.06■□□□□ 0.96
RNF144AP50876 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF144AP50876 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF144AP50876 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF144AP50876 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF144AP50876 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF144AP50876 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RNF144AP50876 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF144AP50876 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
RNF144AP50876 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.05■□□□□ 0.96
RNF144AP50876 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF144AP50876 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF144AP50876 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF144AP50876 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF144AP50876 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF144AP50876 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF144AP50876 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF144AP50876 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF144AP50876 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RNF144AP50876 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RNF144AP50876 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF144AP50876 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF144AP50876 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.04■□□□□ 0.96
RNF144AP50876 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF144AP50876 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF144AP50876 AC068473.5-201ENST00000616428 2072 ntBASIC21.04■□□□□ 0.96
RNF144AP50876 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF144AP50876 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF144AP50876 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RNF144AP50876 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF144AP50876 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF144AP50876 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF144AP50876 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.03■□□□□ 0.96
RNF144AP50876 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.03■□□□□ 0.96
RNF144AP50876 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF144AP50876 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF144AP50876 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF144AP50876 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF144AP50876 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF144AP50876 C9orf163-202ENST00000624034 2573 ntBASIC21.02■□□□□ 0.96
RNF144AP50876 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF144AP50876 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF144AP50876 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.02■□□□□ 0.95
RNF144AP50876 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RNF144AP50876 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RNF144AP50876 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF144AP50876 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF144AP50876 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF144AP50876 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF144AP50876 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF144AP50876 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF144AP50876 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF144AP50876 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF144AP50876 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF144AP50876 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RNF144AP50876 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF144AP50876 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
RNF144AP50876 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF144AP50876 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RNF144AP50876 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF144AP50876 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
RNF144AP50876 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
RNF144AP50876 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF144AP50876 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
RNF144AP50876 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF144AP50876 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF144AP50876 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RNF144AP50876 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RNF144AP50876 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RNF144AP50876 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RNF144AP50876 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RNF144AP50876 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms