Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SRP9P49458 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SRP9P49458 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SRP9P49458 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.09■□□□□ 0.81
SRP9P49458 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
SRP9P49458 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.08■□□□□ 0.81
SRP9P49458 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SRP9P49458 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.08■□□□□ 0.81
SRP9P49458 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.08■□□□□ 0.8
SRP9P49458 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SRP9P49458 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SRP9P49458 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.08■□□□□ 0.8
SRP9P49458 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SRP9P49458 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SRP9P49458 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SRP9P49458 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SRP9P49458 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SRP9P49458 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.07■□□□□ 0.8
SRP9P49458 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SRP9P49458 AL592295.1-201ENST00000400984 884 ntBASIC20.07■□□□□ 0.8
SRP9P49458 AC022616.5-201ENST00000518796 181 ntBASIC20.07■□□□□ 0.8
SRP9P49458 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SRP9P49458 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.06■□□□□ 0.8
SRP9P49458 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SRP9P49458 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.06■□□□□ 0.8
SRP9P49458 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
SRP9P49458 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SRP9P49458 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.06■□□□□ 0.8
SRP9P49458 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.06■□□□□ 0.8
SRP9P49458 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SRP9P49458 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
SRP9P49458 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.06■□□□□ 0.8
SRP9P49458 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.06■□□□□ 0.8
SRP9P49458 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SRP9P49458 FOXO3B-201ENST00000395675 1928 ntBASIC20.06■□□□□ 0.8
SRP9P49458 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SRP9P49458 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SRP9P49458 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SRP9P49458 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.05■□□□□ 0.8
SRP9P49458 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SRP9P49458 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SRP9P49458 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.05■□□□□ 0.8
SRP9P49458 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SRP9P49458 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SRP9P49458 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SRP9P49458 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRP9P49458 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.04■□□□□ 0.8
SRP9P49458 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRP9P49458 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRP9P49458 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SRP9P49458 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRP9P49458 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.04■□□□□ 0.8
SRP9P49458 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.04■□□□□ 0.8
SRP9P49458 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRP9P49458 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.04■□□□□ 0.8
SRP9P49458 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
SRP9P49458 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SRP9P49458 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRP9P49458 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SRP9P49458 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.03■□□□□ 0.8
SRP9P49458 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
SRP9P49458 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.03■□□□□ 0.8
SRP9P49458 YBX1P4-201ENST00000392794 808 ntBASIC20.03■□□□□ 0.8
SRP9P49458 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.03■□□□□ 0.8
SRP9P49458 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SRP9P49458 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRP9P49458 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRP9P49458 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SRP9P49458 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SRP9P49458 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRP9P49458 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SRP9P49458 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SRP9P49458 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRP9P49458 PVT1_1.1-201ENST00000615125 194 ntBASIC20.02■□□□□ 0.8
SRP9P49458 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRP9P49458 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.02■□□□□ 0.8
SRP9P49458 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SRP9P49458 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRP9P49458 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SRP9P49458 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SRP9P49458 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRP9P49458 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SRP9P49458 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SRP9P49458 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SRP9P49458 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.01■□□□□ 0.79
SRP9P49458 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SRP9P49458 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRP9P49458 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SRP9P49458 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SRP9P49458 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRP9P49458 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
SRP9P49458 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SRP9P49458 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRP9P49458 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRP9P49458 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRP9P49458 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20■□□□□ 0.79
SRP9P49458 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20■□□□□ 0.79
SRP9P49458 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20■□□□□ 0.79
SRP9P49458 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SRP9P49458 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms