Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 RARRES2P11-201ENST00000635158 484 ntBASIC29.39■■■□□ 2.3
ATP6V1AP38606 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
ATP6V1AP38606 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
ATP6V1AP38606 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
ATP6V1AP38606 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
ATP6V1AP38606 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.29
ATP6V1AP38606 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
ATP6V1AP38606 AC090192.1-201ENST00000517740 490 ntBASIC29.38■■■□□ 2.29
ATP6V1AP38606 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC29.38■■■□□ 2.29
ATP6V1AP38606 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC29.38■■■□□ 2.29
ATP6V1AP38606 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
ATP6V1AP38606 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
ATP6V1AP38606 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC29.38■■■□□ 2.29
ATP6V1AP38606 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC29.38■■■□□ 2.29
ATP6V1AP38606 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
ATP6V1AP38606 SNX3-202ENST00000349379 890 ntTSL 2 BASIC29.37■■■□□ 2.29
ATP6V1AP38606 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC29.37■■■□□ 2.29
ATP6V1AP38606 NKILA-201ENST00000613231 537 ntTSL 4 BASIC29.37■■■□□ 2.29
ATP6V1AP38606 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
ATP6V1AP38606 HACD1-201ENST00000326961 773 ntTSL 2 BASIC29.36■■■□□ 2.29
ATP6V1AP38606 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
ATP6V1AP38606 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
ATP6V1AP38606 AC022517.1-201ENST00000592429 346 ntBASIC29.36■■■□□ 2.29
ATP6V1AP38606 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
ATP6V1AP38606 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC29.36■■■□□ 2.29
ATP6V1AP38606 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC29.35■■■□□ 2.29
ATP6V1AP38606 VGF-203ENST00000611537 1622 ntTSL 5 BASIC29.35■■■□□ 2.29
ATP6V1AP38606 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC29.35■■■□□ 2.29
ATP6V1AP38606 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
ATP6V1AP38606 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC29.35■■■□□ 2.29
ATP6V1AP38606 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC29.35■■■□□ 2.29
ATP6V1AP38606 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
ATP6V1AP38606 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC29.34■■■□□ 2.29
ATP6V1AP38606 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC29.34■■■□□ 2.29
ATP6V1AP38606 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC29.34■■■□□ 2.29
ATP6V1AP38606 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC29.34■■■□□ 2.29
ATP6V1AP38606 AL031602.1-201ENST00000633169 911 ntBASIC29.34■■■□□ 2.29
ATP6V1AP38606 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
ATP6V1AP38606 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
ATP6V1AP38606 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
ATP6V1AP38606 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
ATP6V1AP38606 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC29.33■■■□□ 2.29
ATP6V1AP38606 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
ATP6V1AP38606 AC126544.1-201ENST00000580842 1059 ntBASIC29.33■■■□□ 2.29
ATP6V1AP38606 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC29.33■■■□□ 2.29
ATP6V1AP38606 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC29.33■■■□□ 2.29
ATP6V1AP38606 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC29.33■■■□□ 2.29
ATP6V1AP38606 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
ATP6V1AP38606 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC29.32■■■□□ 2.28
ATP6V1AP38606 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC29.32■■■□□ 2.28
ATP6V1AP38606 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
ATP6V1AP38606 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC29.32■■■□□ 2.28
ATP6V1AP38606 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC29.32■■■□□ 2.28
ATP6V1AP38606 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC29.32■■■□□ 2.28
ATP6V1AP38606 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC29.32■■■□□ 2.28
ATP6V1AP38606 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
ATP6V1AP38606 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
ATP6V1AP38606 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC29.31■■■□□ 2.28
ATP6V1AP38606 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
ATP6V1AP38606 KRT18P5-201ENST00000436075 1291 ntBASIC29.31■■■□□ 2.28
ATP6V1AP38606 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC29.31■■■□□ 2.28
ATP6V1AP38606 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC29.31■■■□□ 2.28
ATP6V1AP38606 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
ATP6V1AP38606 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
ATP6V1AP38606 pRNA.6-201ENST00000610482 90 ntBASIC29.31■■■□□ 2.28
ATP6V1AP38606 pRNA.5-201ENST00000612139 90 ntBASIC29.31■■■□□ 2.28
ATP6V1AP38606 pRNA.11-201ENST00000618423 90 ntBASIC29.31■■■□□ 2.28
ATP6V1AP38606 pRNA.13-201ENST00000619112 90 ntBASIC29.31■■■□□ 2.28
ATP6V1AP38606 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
ATP6V1AP38606 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
ATP6V1AP38606 LSR-205ENST00000427250 1606 ntTSL 2 BASIC29.31■■■□□ 2.28
ATP6V1AP38606 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
ATP6V1AP38606 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
ATP6V1AP38606 YBX1P1-201ENST00000445822 960 ntBASIC29.3■■■□□ 2.28
ATP6V1AP38606 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC29.3■■■□□ 2.28
ATP6V1AP38606 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
ATP6V1AP38606 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC29.3■■■□□ 2.28
ATP6V1AP38606 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ATP6V1AP38606 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ATP6V1AP38606 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC29.29■■■□□ 2.28
ATP6V1AP38606 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC29.29■■■□□ 2.28
ATP6V1AP38606 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC29.29■■■□□ 2.28
ATP6V1AP38606 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
ATP6V1AP38606 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC29.28■■■□□ 2.28
ATP6V1AP38606 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
ATP6V1AP38606 TSPY26P-201ENST00000476365 1326 ntBASIC29.28■■■□□ 2.28
ATP6V1AP38606 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC29.28■■■□□ 2.28
ATP6V1AP38606 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC29.28■■■□□ 2.28
ATP6V1AP38606 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC29.28■■■□□ 2.28
ATP6V1AP38606 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC29.28■■■□□ 2.28
ATP6V1AP38606 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
ATP6V1AP38606 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
ATP6V1AP38606 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC29.28■■■□□ 2.28
ATP6V1AP38606 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
ATP6V1AP38606 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
ATP6V1AP38606 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
ATP6V1AP38606 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
ATP6V1AP38606 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC29.27■■■□□ 2.28
ATP6V1AP38606 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC29.27■■■□□ 2.28
ATP6V1AP38606 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC29.27■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms