Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.46■□□□□ 0.55
SAA4P35542 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.46■□□□□ 0.55
SAA4P35542 SRD5A1P1-201ENST00000442297 786 ntBASIC18.46■□□□□ 0.55
SAA4P35542 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.46■□□□□ 0.55
SAA4P35542 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.46■□□□□ 0.55
SAA4P35542 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SAA4P35542 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SAA4P35542 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.46■□□□□ 0.55
SAA4P35542 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SAA4P35542 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SAA4P35542 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SAA4P35542 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SAA4P35542 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.45■□□□□ 0.54
SAA4P35542 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SAA4P35542 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SAA4P35542 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SAA4P35542 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SAA4P35542 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SAA4P35542 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.45■□□□□ 0.54
SAA4P35542 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
SAA4P35542 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.44■□□□□ 0.54
SAA4P35542 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SAA4P35542 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.44■□□□□ 0.54
SAA4P35542 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SAA4P35542 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.44■□□□□ 0.54
SAA4P35542 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SAA4P35542 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.43■□□□□ 0.54
SAA4P35542 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SAA4P35542 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.43■□□□□ 0.54
SAA4P35542 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.43■□□□□ 0.54
SAA4P35542 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
SAA4P35542 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.43■□□□□ 0.54
SAA4P35542 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SAA4P35542 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SAA4P35542 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
SAA4P35542 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.43■□□□□ 0.54
SAA4P35542 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SAA4P35542 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SAA4P35542 LINC01124-201ENST00000409786 2117 ntBASIC18.43■□□□□ 0.54
SAA4P35542 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SAA4P35542 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SAA4P35542 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SAA4P35542 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SAA4P35542 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.42■□□□□ 0.54
SAA4P35542 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SAA4P35542 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SAA4P35542 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SAA4P35542 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.42■□□□□ 0.54
SAA4P35542 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.41■□□□□ 0.54
SAA4P35542 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SAA4P35542 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SAA4P35542 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SAA4P35542 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.41■□□□□ 0.54
SAA4P35542 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SAA4P35542 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.41■□□□□ 0.54
SAA4P35542 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.41■□□□□ 0.54
SAA4P35542 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.41■□□□□ 0.54
SAA4P35542 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SAA4P35542 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SAA4P35542 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SAA4P35542 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.41■□□□□ 0.54
SAA4P35542 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SAA4P35542 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.41■□□□□ 0.54
SAA4P35542 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SAA4P35542 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SAA4P35542 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SAA4P35542 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SAA4P35542 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SAA4P35542 AC096631.2-201ENST00000436136 790 ntBASIC18.4■□□□□ 0.54
SAA4P35542 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SAA4P35542 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SAA4P35542 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SAA4P35542 AC009102.2-201ENST00000606772 1639 ntBASIC18.4■□□□□ 0.54
SAA4P35542 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SAA4P35542 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SAA4P35542 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SAA4P35542 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SAA4P35542 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.39■□□□□ 0.54
SAA4P35542 AL139125.2-201ENST00000623134 1869 ntBASIC18.39■□□□□ 0.54
SAA4P35542 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.39■□□□□ 0.53
SAA4P35542 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SAA4P35542 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SAA4P35542 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.39■□□□□ 0.53
SAA4P35542 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.39■□□□□ 0.53
SAA4P35542 AL139246.5-201ENST00000606645 996 ntBASIC18.39■□□□□ 0.53
SAA4P35542 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SAA4P35542 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SAA4P35542 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SAA4P35542 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.38■□□□□ 0.53
SAA4P35542 AC141586.4-201ENST00000624558 1573 ntBASIC18.38■□□□□ 0.53
SAA4P35542 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SAA4P35542 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
SAA4P35542 LINC00543-201ENST00000567234 1845 ntBASIC18.38■□□□□ 0.53
SAA4P35542 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SAA4P35542 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SAA4P35542 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.38■□□□□ 0.53
SAA4P35542 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SAA4P35542 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SAA4P35542 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.38■□□□□ 0.53
SAA4P35542 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms