Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.97■□□□□ 0.79
ATF1P18846 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATF1P18846 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ATF1P18846 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATF1P18846 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATF1P18846 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ATF1P18846 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATF1P18846 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATF1P18846 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATF1P18846 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATF1P18846 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATF1P18846 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
ATF1P18846 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATF1P18846 SPCS2P3-201ENST00000500401 656 ntBASIC19.96■□□□□ 0.79
ATF1P18846 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ATF1P18846 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
ATF1P18846 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.95■□□□□ 0.79
ATF1P18846 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATF1P18846 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
ATF1P18846 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
ATF1P18846 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
ATF1P18846 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.95■□□□□ 0.78
ATF1P18846 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATF1P18846 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ATF1P18846 AC092068.2-201ENST00000590491 1708 ntBASIC19.95■□□□□ 0.78
ATF1P18846 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATF1P18846 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.95■□□□□ 0.78
ATF1P18846 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ATF1P18846 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.94■□□□□ 0.78
ATF1P18846 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.94■□□□□ 0.78
ATF1P18846 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATF1P18846 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.94■□□□□ 0.78
ATF1P18846 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATF1P18846 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.94■□□□□ 0.78
ATF1P18846 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ATF1P18846 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATF1P18846 LINC00526-201ENST00000581067 1875 ntBASIC19.94■□□□□ 0.78
ATF1P18846 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATF1P18846 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.94■□□□□ 0.78
ATF1P18846 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
ATF1P18846 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ATF1P18846 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATF1P18846 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
ATF1P18846 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.93■□□□□ 0.78
ATF1P18846 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATF1P18846 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.93■□□□□ 0.78
ATF1P18846 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.93■□□□□ 0.78
ATF1P18846 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATF1P18846 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
ATF1P18846 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
ATF1P18846 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
ATF1P18846 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
ATF1P18846 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.93■□□□□ 0.78
ATF1P18846 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ATF1P18846 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ATF1P18846 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATF1P18846 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.92■□□□□ 0.78
ATF1P18846 GUSBP5-202ENST00000510805 1989 ntBASIC19.92■□□□□ 0.78
ATF1P18846 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
ATF1P18846 AC087393.1-201ENST00000582896 145 ntBASIC19.92■□□□□ 0.78
ATF1P18846 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ATF1P18846 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.92■□□□□ 0.78
ATF1P18846 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.91■□□□□ 0.78
ATF1P18846 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATF1P18846 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
ATF1P18846 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATF1P18846 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATF1P18846 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATF1P18846 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATF1P18846 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATF1P18846 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATF1P18846 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATF1P18846 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.91■□□□□ 0.78
ATF1P18846 MIR6765-201ENST00000614092 87 ntBASIC19.91■□□□□ 0.78
ATF1P18846 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
ATF1P18846 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.91■□□□□ 0.78
ATF1P18846 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATF1P18846 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATF1P18846 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATF1P18846 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF1P18846 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.9■□□□□ 0.78
ATF1P18846 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF1P18846 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF1P18846 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATF1P18846 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.9■□□□□ 0.78
ATF1P18846 AL592295.1-201ENST00000400984 884 ntBASIC19.9■□□□□ 0.78
ATF1P18846 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF1P18846 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF1P18846 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF1P18846 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.9■□□□□ 0.78
ATF1P18846 AC090877.2-201ENST00000558441 1738 ntBASIC19.9■□□□□ 0.78
ATF1P18846 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATF1P18846 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.9■□□□□ 0.78
ATF1P18846 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATF1P18846 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATF1P18846 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
ATF1P18846 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
ATF1P18846 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
ATF1P18846 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
ATF1P18846 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms