Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PRKCAP17252 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRKCAP17252 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRKCAP17252 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.95■□□□□ 0.94
PRKCAP17252 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.95■□□□□ 0.94
PRKCAP17252 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRKCAP17252 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
PRKCAP17252 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRKCAP17252 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PRKCAP17252 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.94■□□□□ 0.94
PRKCAP17252 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.94■□□□□ 0.94
PRKCAP17252 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRKCAP17252 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.94■□□□□ 0.94
PRKCAP17252 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.94■□□□□ 0.94
PRKCAP17252 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRKCAP17252 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRKCAP17252 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRKCAP17252 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRKCAP17252 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRKCAP17252 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PRKCAP17252 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PRKCAP17252 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.93■□□□□ 0.94
PRKCAP17252 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PRKCAP17252 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PRKCAP17252 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.93■□□□□ 0.94
PRKCAP17252 AC009299.2-201ENST00000482477 511 ntBASIC20.93■□□□□ 0.94
PRKCAP17252 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PRKCAP17252 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRKCAP17252 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PRKCAP17252 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PRKCAP17252 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PRKCAP17252 AC131274.2-201ENST00000580697 1507 ntBASIC20.93■□□□□ 0.94
PRKCAP17252 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRKCAP17252 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PRKCAP17252 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.92■□□□□ 0.94
PRKCAP17252 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PRKCAP17252 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRKCAP17252 BX664725.1-201ENST00000438252 379 ntBASIC20.92■□□□□ 0.94
PRKCAP17252 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PRKCAP17252 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.92■□□□□ 0.94
PRKCAP17252 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PRKCAP17252 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.92■□□□□ 0.94
PRKCAP17252 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PRKCAP17252 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.92■□□□□ 0.94
PRKCAP17252 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRKCAP17252 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRKCAP17252 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRKCAP17252 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PRKCAP17252 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.91■□□□□ 0.94
PRKCAP17252 AL022069.1-201ENST00000568025 1636 ntBASIC20.91■□□□□ 0.94
PRKCAP17252 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PRKCAP17252 AL161729.1-201ENST00000604104 1402 ntBASIC20.91■□□□□ 0.94
PRKCAP17252 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
PRKCAP17252 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRKCAP17252 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRKCAP17252 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PRKCAP17252 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRKCAP17252 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PRKCAP17252 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PRKCAP17252 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.9■□□□□ 0.94
PRKCAP17252 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PRKCAP17252 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.9■□□□□ 0.94
PRKCAP17252 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRKCAP17252 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRKCAP17252 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRKCAP17252 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRKCAP17252 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PRKCAP17252 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PRKCAP17252 AC021242.3-201ENST00000607598 1377 ntBASIC20.89■□□□□ 0.93
PRKCAP17252 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRKCAP17252 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PRKCAP17252 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PRKCAP17252 Z92544.1-202ENST00000571933 1220 ntBASIC20.89■□□□□ 0.93
PRKCAP17252 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PRKCAP17252 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PRKCAP17252 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PRKCAP17252 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PRKCAP17252 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRKCAP17252 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PRKCAP17252 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.88■□□□□ 0.93
PRKCAP17252 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.88■□□□□ 0.93
PRKCAP17252 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.88■□□□□ 0.93
PRKCAP17252 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.88■□□□□ 0.93
PRKCAP17252 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.88■□□□□ 0.93
PRKCAP17252 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRKCAP17252 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.88■□□□□ 0.93
PRKCAP17252 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PRKCAP17252 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRKCAP17252 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRKCAP17252 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRKCAP17252 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.87■□□□□ 0.93
PRKCAP17252 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.87■□□□□ 0.93
PRKCAP17252 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRKCAP17252 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRKCAP17252 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PRKCAP17252 AC004812.2-201ENST00000611079 2094 ntBASIC20.87■□□□□ 0.93
PRKCAP17252 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PRKCAP17252 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRKCAP17252 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PRKCAP17252 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms