Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BCKDHAP12694 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.77■■□□□ 1.08
BCKDHAP12694 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BCKDHAP12694 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
BCKDHAP12694 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BCKDHAP12694 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BCKDHAP12694 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
BCKDHAP12694 AC120024.1-201ENST00000562672 995 ntBASIC21.77■■□□□ 1.08
BCKDHAP12694 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
BCKDHAP12694 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
BCKDHAP12694 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BCKDHAP12694 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
BCKDHAP12694 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.76■■□□□ 1.07
BCKDHAP12694 ALDH1A3-203ENST00000557963 1670 ntBASIC21.76■■□□□ 1.07
BCKDHAP12694 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BCKDHAP12694 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BCKDHAP12694 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BCKDHAP12694 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
BCKDHAP12694 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
BCKDHAP12694 PVT1_1.1-201ENST00000615125 194 ntBASIC21.76■■□□□ 1.07
BCKDHAP12694 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BCKDHAP12694 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
BCKDHAP12694 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BCKDHAP12694 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.75■■□□□ 1.07
BCKDHAP12694 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BCKDHAP12694 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BCKDHAP12694 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
BCKDHAP12694 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BCKDHAP12694 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.75■■□□□ 1.07
BCKDHAP12694 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
BCKDHAP12694 DUSP8P3-201ENST00000399571 1760 ntBASIC21.75■■□□□ 1.07
BCKDHAP12694 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
BCKDHAP12694 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.75■■□□□ 1.07
BCKDHAP12694 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.75■■□□□ 1.07
BCKDHAP12694 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
BCKDHAP12694 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
BCKDHAP12694 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
BCKDHAP12694 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
BCKDHAP12694 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
BCKDHAP12694 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BCKDHAP12694 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BCKDHAP12694 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.75■■□□□ 1.07
BCKDHAP12694 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
BCKDHAP12694 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
BCKDHAP12694 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
BCKDHAP12694 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
BCKDHAP12694 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.74■■□□□ 1.07
BCKDHAP12694 AC074183.2-201ENST00000623112 922 ntBASIC21.74■■□□□ 1.07
BCKDHAP12694 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
BCKDHAP12694 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.74■■□□□ 1.07
BCKDHAP12694 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BCKDHAP12694 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
BCKDHAP12694 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
BCKDHAP12694 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.73■■□□□ 1.07
BCKDHAP12694 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
BCKDHAP12694 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
BCKDHAP12694 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.73■■□□□ 1.07
BCKDHAP12694 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BCKDHAP12694 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
BCKDHAP12694 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
BCKDHAP12694 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
BCKDHAP12694 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
BCKDHAP12694 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BCKDHAP12694 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
BCKDHAP12694 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BCKDHAP12694 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
BCKDHAP12694 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
BCKDHAP12694 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
BCKDHAP12694 TSPY13P-201ENST00000338964 914 ntBASIC21.72■■□□□ 1.07
BCKDHAP12694 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.72■■□□□ 1.07
BCKDHAP12694 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.72■■□□□ 1.07
BCKDHAP12694 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
BCKDHAP12694 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
BCKDHAP12694 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
BCKDHAP12694 KRT18P24-201ENST00000344739 1156 ntBASIC21.71■■□□□ 1.07
BCKDHAP12694 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.71■■□□□ 1.07
BCKDHAP12694 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.71■■□□□ 1.07
BCKDHAP12694 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BCKDHAP12694 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
BCKDHAP12694 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
BCKDHAP12694 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.71■■□□□ 1.07
BCKDHAP12694 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
BCKDHAP12694 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
BCKDHAP12694 AF131216.4-201ENST00000638924 1588 ntBASIC21.7■■□□□ 1.06
BCKDHAP12694 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BCKDHAP12694 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BCKDHAP12694 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.7■■□□□ 1.06
BCKDHAP12694 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.7■■□□□ 1.06
BCKDHAP12694 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.7■■□□□ 1.06
BCKDHAP12694 AC010980.1-201ENST00000587192 1142 ntBASIC21.7■■□□□ 1.06
BCKDHAP12694 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
BCKDHAP12694 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BCKDHAP12694 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BCKDHAP12694 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.7■■□□□ 1.06
BCKDHAP12694 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.7■■□□□ 1.06
BCKDHAP12694 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
BCKDHAP12694 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
BCKDHAP12694 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.7■■□□□ 1.06
BCKDHAP12694 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BCKDHAP12694 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms