Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.86■□□□□ 0.45
TRGV3P03979 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRGV3P03979 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRGV3P03979 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRGV3P03979 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.86■□□□□ 0.45
TRGV3P03979 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.86■□□□□ 0.45
TRGV3P03979 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRGV3P03979 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRGV3P03979 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRGV3P03979 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRGV3P03979 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRGV3P03979 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRGV3P03979 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRGV3P03979 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRGV3P03979 AC010997.5-201ENST00000609182 354 ntBASIC17.85■□□□□ 0.45
TRGV3P03979 AC004812.2-201ENST00000611079 2094 ntBASIC17.84■□□□□ 0.45
TRGV3P03979 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRGV3P03979 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRGV3P03979 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRGV3P03979 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
TRGV3P03979 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRGV3P03979 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRGV3P03979 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRGV3P03979 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRGV3P03979 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRGV3P03979 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRGV3P03979 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.84■□□□□ 0.45
TRGV3P03979 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TRGV3P03979 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TRGV3P03979 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.84■□□□□ 0.45
TRGV3P03979 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRGV3P03979 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC17.84■□□□□ 0.45
TRGV3P03979 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRGV3P03979 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRGV3P03979 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRGV3P03979 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.83■□□□□ 0.45
TRGV3P03979 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRGV3P03979 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
TRGV3P03979 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
TRGV3P03979 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
TRGV3P03979 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRGV3P03979 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRGV3P03979 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.83■□□□□ 0.44
TRGV3P03979 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
TRGV3P03979 KRT16P3-201ENST00000439127 1283 ntBASIC17.83■□□□□ 0.44
TRGV3P03979 UNC93B8-201ENST00000511903 705 ntBASIC17.83■□□□□ 0.44
TRGV3P03979 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.83■□□□□ 0.44
TRGV3P03979 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.83■□□□□ 0.44
TRGV3P03979 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRGV3P03979 MIR6722-201ENST00000617286 78 ntBASIC17.83■□□□□ 0.44
TRGV3P03979 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRGV3P03979 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.83■□□□□ 0.44
TRGV3P03979 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRGV3P03979 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRGV3P03979 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRGV3P03979 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.83■□□□□ 0.44
TRGV3P03979 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRGV3P03979 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.82■□□□□ 0.44
TRGV3P03979 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.82■□□□□ 0.44
TRGV3P03979 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRGV3P03979 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.82■□□□□ 0.44
TRGV3P03979 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC17.82■□□□□ 0.44
TRGV3P03979 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.82■□□□□ 0.44
TRGV3P03979 ALDH1A3-203ENST00000557963 1670 ntBASIC17.82■□□□□ 0.44
TRGV3P03979 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.82■□□□□ 0.44
TRGV3P03979 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRGV3P03979 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRGV3P03979 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRGV3P03979 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRGV3P03979 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRGV3P03979 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRGV3P03979 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRGV3P03979 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRGV3P03979 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRGV3P03979 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRGV3P03979 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRGV3P03979 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRGV3P03979 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRGV3P03979 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRGV3P03979 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRGV3P03979 ABCB10P4-201ENST00000566803 2184 ntBASIC17.8■□□□□ 0.44
TRGV3P03979 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRGV3P03979 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.8■□□□□ 0.44
TRGV3P03979 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.8■□□□□ 0.44
TRGV3P03979 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.8■□□□□ 0.44
TRGV3P03979 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.8■□□□□ 0.44
TRGV3P03979 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TRGV3P03979 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRGV3P03979 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRGV3P03979 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TRGV3P03979 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRGV3P03979 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.79■□□□□ 0.44
TRGV3P03979 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.79■□□□□ 0.44
TRGV3P03979 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRGV3P03979 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
TRGV3P03979 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRGV3P03979 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.79■□□□□ 0.44
TRGV3P03979 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.79■□□□□ 0.44
TRGV3P03979 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.79■□□□□ 0.44
TRGV3P03979 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms