Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.08■■□□□ 1.29
MT-ND3P03897 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
MT-ND3P03897 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
MT-ND3P03897 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
MT-ND3P03897 KRT8P33-201ENST00000508125 1423 ntBASIC23.08■■□□□ 1.28
MT-ND3P03897 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
MT-ND3P03897 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
MT-ND3P03897 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.07■■□□□ 1.28
MT-ND3P03897 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
MT-ND3P03897 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
MT-ND3P03897 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
MT-ND3P03897 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
MT-ND3P03897 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
MT-ND3P03897 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
MT-ND3P03897 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
MT-ND3P03897 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
MT-ND3P03897 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
MT-ND3P03897 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.07■■□□□ 1.28
MT-ND3P03897 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.07■■□□□ 1.28
MT-ND3P03897 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
MT-ND3P03897 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.06■■□□□ 1.28
MT-ND3P03897 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
MT-ND3P03897 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
MT-ND3P03897 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
MT-ND3P03897 MIR4508-201ENST00000584178 70 ntBASIC23.06■■□□□ 1.28
MT-ND3P03897 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
MT-ND3P03897 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
MT-ND3P03897 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.06■■□□□ 1.28
MT-ND3P03897 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
MT-ND3P03897 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
MT-ND3P03897 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
MT-ND3P03897 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.05■■□□□ 1.28
MT-ND3P03897 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
MT-ND3P03897 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.05■■□□□ 1.28
MT-ND3P03897 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.05■■□□□ 1.28
MT-ND3P03897 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.05■■□□□ 1.28
MT-ND3P03897 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
MT-ND3P03897 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
MT-ND3P03897 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.05■■□□□ 1.28
MT-ND3P03897 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
MT-ND3P03897 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
MT-ND3P03897 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
MT-ND3P03897 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.04■■□□□ 1.28
MT-ND3P03897 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.04■■□□□ 1.28
MT-ND3P03897 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
MT-ND3P03897 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.04■■□□□ 1.28
MT-ND3P03897 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
MT-ND3P03897 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.04■■□□□ 1.28
MT-ND3P03897 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
MT-ND3P03897 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
MT-ND3P03897 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
MT-ND3P03897 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
MT-ND3P03897 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
MT-ND3P03897 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
MT-ND3P03897 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.03■■□□□ 1.28
MT-ND3P03897 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
MT-ND3P03897 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.03■■□□□ 1.28
MT-ND3P03897 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
MT-ND3P03897 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
MT-ND3P03897 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
MT-ND3P03897 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
MT-ND3P03897 ANOS2P-203ENST00000472227 1816 ntBASIC23.03■■□□□ 1.28
MT-ND3P03897 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
MT-ND3P03897 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.02■■□□□ 1.28
MT-ND3P03897 AL117328.2-201ENST00000624617 1940 ntBASIC23.02■■□□□ 1.28
MT-ND3P03897 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.02■■□□□ 1.28
MT-ND3P03897 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
MT-ND3P03897 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
MT-ND3P03897 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
MT-ND3P03897 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.02■■□□□ 1.28
MT-ND3P03897 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.02■■□□□ 1.28
MT-ND3P03897 AC019171.1-201ENST00000601251 1056 ntBASIC23.02■■□□□ 1.28
MT-ND3P03897 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
MT-ND3P03897 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
MT-ND3P03897 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
MT-ND3P03897 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.27
MT-ND3P03897 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
MT-ND3P03897 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
MT-ND3P03897 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
MT-ND3P03897 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.01■■□□□ 1.27
MT-ND3P03897 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
MT-ND3P03897 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
MT-ND3P03897 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.01■■□□□ 1.27
MT-ND3P03897 AC103834.1-201ENST00000520383 144 ntBASIC23.01■■□□□ 1.27
MT-ND3P03897 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
MT-ND3P03897 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.01■■□□□ 1.27
MT-ND3P03897 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
MT-ND3P03897 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
MT-ND3P03897 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
MT-ND3P03897 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
MT-ND3P03897 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
MT-ND3P03897 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
MT-ND3P03897 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
MT-ND3P03897 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23■■□□□ 1.27
MT-ND3P03897 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
MT-ND3P03897 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23■■□□□ 1.27
MT-ND3P03897 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23■■□□□ 1.27
MT-ND3P03897 PVT1_1.1-201ENST00000615125 194 ntBASIC23■■□□□ 1.27
MT-ND3P03897 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
MT-ND3P03897 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms