Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
MT-ND1P03886 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MT-ND1P03886 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.41■■□□□ 1.02
MT-ND1P03886 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MT-ND1P03886 DUSP8P3-201ENST00000399571 1760 ntBASIC21.41■■□□□ 1.02
MT-ND1P03886 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
MT-ND1P03886 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
MT-ND1P03886 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
MT-ND1P03886 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.41■■□□□ 1.02
MT-ND1P03886 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
MT-ND1P03886 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MT-ND1P03886 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.41■■□□□ 1.02
MT-ND1P03886 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
MT-ND1P03886 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
MT-ND1P03886 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MT-ND1P03886 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
MT-ND1P03886 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MT-ND1P03886 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.41■■□□□ 1.02
MT-ND1P03886 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
MT-ND1P03886 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
MT-ND1P03886 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.4■■□□□ 1.02
MT-ND1P03886 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.4■■□□□ 1.02
MT-ND1P03886 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
MT-ND1P03886 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
MT-ND1P03886 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
MT-ND1P03886 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
MT-ND1P03886 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.4■■□□□ 1.02
MT-ND1P03886 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.4■■□□□ 1.02
MT-ND1P03886 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
MT-ND1P03886 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
MT-ND1P03886 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
MT-ND1P03886 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
MT-ND1P03886 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
MT-ND1P03886 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.39■■□□□ 1.01
MT-ND1P03886 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
MT-ND1P03886 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MT-ND1P03886 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MT-ND1P03886 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MT-ND1P03886 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MT-ND1P03886 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
MT-ND1P03886 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
MT-ND1P03886 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MT-ND1P03886 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
MT-ND1P03886 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
MT-ND1P03886 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.38■■□□□ 1.01
MT-ND1P03886 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MT-ND1P03886 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
MT-ND1P03886 RNF126P1-201ENST00000567452 1320 ntBASIC21.38■■□□□ 1.01
MT-ND1P03886 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MT-ND1P03886 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
MT-ND1P03886 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.38■■□□□ 1.01
MT-ND1P03886 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
MT-ND1P03886 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.38■■□□□ 1.01
MT-ND1P03886 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
MT-ND1P03886 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
MT-ND1P03886 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
MT-ND1P03886 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
MT-ND1P03886 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
MT-ND1P03886 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MT-ND1P03886 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
MT-ND1P03886 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MT-ND1P03886 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MT-ND1P03886 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MT-ND1P03886 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MT-ND1P03886 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
MT-ND1P03886 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.37■■□□□ 1.01
MT-ND1P03886 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MT-ND1P03886 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
MT-ND1P03886 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MT-ND1P03886 GUSBP5-202ENST00000510805 1989 ntBASIC21.36■■□□□ 1.01
MT-ND1P03886 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.36■■□□□ 1.01
MT-ND1P03886 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MT-ND1P03886 AC092068.2-201ENST00000590491 1708 ntBASIC21.36■■□□□ 1.01
MT-ND1P03886 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
MT-ND1P03886 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.36■■□□□ 1.01
MT-ND1P03886 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
MT-ND1P03886 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
MT-ND1P03886 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MT-ND1P03886 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.36■■□□□ 1.01
MT-ND1P03886 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MT-ND1P03886 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MT-ND1P03886 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
MT-ND1P03886 AC009831.1-201ENST00000580420 1582 ntBASIC21.36■■□□□ 1.01
MT-ND1P03886 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
MT-ND1P03886 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
MT-ND1P03886 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MT-ND1P03886 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.35■■□□□ 1.01
MT-ND1P03886 AC133552.2-201ENST00000619106 1032 ntBASIC21.35■■□□□ 1.01
MT-ND1P03886 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.35■■□□□ 1.01
MT-ND1P03886 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
MT-ND1P03886 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MT-ND1P03886 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.34■■□□□ 1.01
MT-ND1P03886 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.34■■□□□ 1.01
MT-ND1P03886 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
MT-ND1P03886 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MT-ND1P03886 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.34■■□□□ 1.01
MT-ND1P03886 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
MT-ND1P03886 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
MT-ND1P03886 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
MT-ND1P03886 LINC00526-201ENST00000581067 1875 ntBASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 233.3 ms