Protein–RNA interactions for Protein: P00414

MT-CO3, Cytochrome c oxidase subunit 3, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO3P00414 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MT-CO3P00414 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.82■■□□□ 1.08
MT-CO3P00414 AC090192.1-201ENST00000517740 490 ntBASIC21.82■■□□□ 1.08
MT-CO3P00414 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
MT-CO3P00414 AC126544.1-201ENST00000580842 1059 ntBASIC21.82■■□□□ 1.08
MT-CO3P00414 MIR6089-201ENST00000616698 64 ntBASIC21.82■■□□□ 1.08
MT-CO3P00414 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MT-CO3P00414 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
MT-CO3P00414 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.81■■□□□ 1.08
MT-CO3P00414 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
MT-CO3P00414 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
MT-CO3P00414 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.81■■□□□ 1.08
MT-CO3P00414 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MT-CO3P00414 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.81■■□□□ 1.08
MT-CO3P00414 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MT-CO3P00414 AC022517.1-201ENST00000592429 346 ntBASIC21.81■■□□□ 1.08
MT-CO3P00414 IKBKGP1-201ENST00000612193 1073 ntBASIC21.81■■□□□ 1.08
MT-CO3P00414 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.81■■□□□ 1.08
MT-CO3P00414 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.81■■□□□ 1.08
MT-CO3P00414 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MT-CO3P00414 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
MT-CO3P00414 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.8■■□□□ 1.08
MT-CO3P00414 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
MT-CO3P00414 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.8■■□□□ 1.08
MT-CO3P00414 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.8■■□□□ 1.08
MT-CO3P00414 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MT-CO3P00414 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
MT-CO3P00414 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.8■■□□□ 1.08
MT-CO3P00414 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.8■■□□□ 1.08
MT-CO3P00414 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.8■■□□□ 1.08
MT-CO3P00414 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
MT-CO3P00414 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.8■■□□□ 1.08
MT-CO3P00414 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.79■■□□□ 1.08
MT-CO3P00414 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.79■■□□□ 1.08
MT-CO3P00414 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.79■■□□□ 1.08
MT-CO3P00414 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.79■■□□□ 1.08
MT-CO3P00414 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.79■■□□□ 1.08
MT-CO3P00414 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.79■■□□□ 1.08
MT-CO3P00414 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.79■■□□□ 1.08
MT-CO3P00414 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MT-CO3P00414 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
MT-CO3P00414 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.79■■□□□ 1.08
MT-CO3P00414 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
MT-CO3P00414 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MT-CO3P00414 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MT-CO3P00414 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
MT-CO3P00414 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MT-CO3P00414 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MT-CO3P00414 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
MT-CO3P00414 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.78■■□□□ 1.08
MT-CO3P00414 YBX1P1-201ENST00000445822 960 ntBASIC21.78■■□□□ 1.08
MT-CO3P00414 pRNA.6-201ENST00000610482 90 ntBASIC21.78■■□□□ 1.08
MT-CO3P00414 pRNA.5-201ENST00000612139 90 ntBASIC21.78■■□□□ 1.08
MT-CO3P00414 pRNA.11-201ENST00000618423 90 ntBASIC21.78■■□□□ 1.08
MT-CO3P00414 pRNA.13-201ENST00000619112 90 ntBASIC21.78■■□□□ 1.08
MT-CO3P00414 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
MT-CO3P00414 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MT-CO3P00414 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MT-CO3P00414 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
MT-CO3P00414 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.77■■□□□ 1.08
MT-CO3P00414 KRT18P5-201ENST00000436075 1291 ntBASIC21.77■■□□□ 1.08
MT-CO3P00414 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.77■■□□□ 1.08
MT-CO3P00414 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.77■■□□□ 1.08
MT-CO3P00414 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.77■■□□□ 1.08
MT-CO3P00414 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MT-CO3P00414 AL137784.2-201ENST00000607332 1000 ntBASIC21.77■■□□□ 1.08
MT-CO3P00414 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.77■■□□□ 1.08
MT-CO3P00414 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MT-CO3P00414 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
MT-CO3P00414 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MT-CO3P00414 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
MT-CO3P00414 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MT-CO3P00414 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MT-CO3P00414 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.76■■□□□ 1.07
MT-CO3P00414 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
MT-CO3P00414 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
MT-CO3P00414 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.76■■□□□ 1.07
MT-CO3P00414 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.76■■□□□ 1.07
MT-CO3P00414 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.76■■□□□ 1.07
MT-CO3P00414 TSPY26P-201ENST00000476365 1326 ntBASIC21.76■■□□□ 1.07
MT-CO3P00414 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
MT-CO3P00414 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MT-CO3P00414 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
MT-CO3P00414 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MT-CO3P00414 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MT-CO3P00414 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
MT-CO3P00414 AL031602.1-201ENST00000633169 911 ntBASIC21.75■■□□□ 1.07
MT-CO3P00414 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.75■■□□□ 1.07
MT-CO3P00414 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MT-CO3P00414 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
MT-CO3P00414 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MT-CO3P00414 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
MT-CO3P00414 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MT-CO3P00414 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
MT-CO3P00414 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
MT-CO3P00414 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.74■■□□□ 1.07
MT-CO3P00414 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
MT-CO3P00414 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MT-CO3P00414 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
MT-CO3P00414 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms