Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.84■■□□□ 1.09
SLC28A2O43868 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC28A2O43868 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SLC28A2O43868 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC28A2O43868 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SLC28A2O43868 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC28A2O43868 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.84■■□□□ 1.09
SLC28A2O43868 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SLC28A2O43868 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SLC28A2O43868 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.83■■□□□ 1.09
SLC28A2O43868 AC141586.4-201ENST00000624558 1573 ntBASIC21.83■■□□□ 1.09
SLC28A2O43868 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SLC28A2O43868 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.83■■□□□ 1.09
SLC28A2O43868 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
SLC28A2O43868 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SLC28A2O43868 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.83■■□□□ 1.08
SLC28A2O43868 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
SLC28A2O43868 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SLC28A2O43868 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.82■■□□□ 1.08
SLC28A2O43868 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
SLC28A2O43868 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.82■■□□□ 1.08
SLC28A2O43868 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SLC28A2O43868 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.82■■□□□ 1.08
SLC28A2O43868 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.82■■□□□ 1.08
SLC28A2O43868 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC28A2O43868 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC28A2O43868 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SLC28A2O43868 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC28A2O43868 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC28A2O43868 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
SLC28A2O43868 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC28A2O43868 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.81■■□□□ 1.08
SLC28A2O43868 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SLC28A2O43868 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SLC28A2O43868 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.81■■□□□ 1.08
SLC28A2O43868 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.81■■□□□ 1.08
SLC28A2O43868 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC28A2O43868 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC28A2O43868 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.8■■□□□ 1.08
SLC28A2O43868 SUDS3P1-201ENST00000505831 966 ntBASIC21.8■■□□□ 1.08
SLC28A2O43868 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.8■■□□□ 1.08
SLC28A2O43868 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.8■■□□□ 1.08
SLC28A2O43868 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SLC28A2O43868 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC28A2O43868 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC28A2O43868 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC28A2O43868 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC28A2O43868 MIR4281-201ENST00000580852 62 ntBASIC21.79■■□□□ 1.08
SLC28A2O43868 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC28A2O43868 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC28A2O43868 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC28A2O43868 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC28A2O43868 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SLC28A2O43868 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SLC28A2O43868 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC28A2O43868 UNC93B3-201ENST00000308076 687 ntBASIC21.78■■□□□ 1.08
SLC28A2O43868 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
SLC28A2O43868 AC105265.2-201ENST00000467189 838 ntBASIC21.78■■□□□ 1.08
SLC28A2O43868 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SLC28A2O43868 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.78■■□□□ 1.08
SLC28A2O43868 AL136162.1-201ENST00000607711 1078 ntBASIC21.78■■□□□ 1.08
SLC28A2O43868 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC28A2O43868 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
SLC28A2O43868 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC28A2O43868 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SLC28A2O43868 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.77■■□□□ 1.08
SLC28A2O43868 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.77■■□□□ 1.08
SLC28A2O43868 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC28A2O43868 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.77■■□□□ 1.08
SLC28A2O43868 AL031432.3-201ENST00000607698 485 ntBASIC21.77■■□□□ 1.08
SLC28A2O43868 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC28A2O43868 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
SLC28A2O43868 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SLC28A2O43868 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SLC28A2O43868 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SLC28A2O43868 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.77■■□□□ 1.07
SLC28A2O43868 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.76■■□□□ 1.07
SLC28A2O43868 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC28A2O43868 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC28A2O43868 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC28A2O43868 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SLC28A2O43868 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.76■■□□□ 1.07
SLC28A2O43868 MIR6821-201ENST00000617625 74 ntBASIC21.76■■□□□ 1.07
SLC28A2O43868 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.76■■□□□ 1.07
SLC28A2O43868 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SLC28A2O43868 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC28A2O43868 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC28A2O43868 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.75■■□□□ 1.07
SLC28A2O43868 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC28A2O43868 HLA-L-211ENST00000482052 1765 ntBASIC21.75■■□□□ 1.07
SLC28A2O43868 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC28A2O43868 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.75■■□□□ 1.07
SLC28A2O43868 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.75■■□□□ 1.07
SLC28A2O43868 AL162430.1-201ENST00000480705 870 ntBASIC21.75■■□□□ 1.07
SLC28A2O43868 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
SLC28A2O43868 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.75■■□□□ 1.07
SLC28A2O43868 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.75■■□□□ 1.07
SLC28A2O43868 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SLC28A2O43868 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC28A2O43868 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms