Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
RNF13O43567 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF13O43567 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF13O43567 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.66■□□□□ 0.9
RNF13O43567 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF13O43567 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF13O43567 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RNF13O43567 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RNF13O43567 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF13O43567 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF13O43567 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RNF13O43567 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF13O43567 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RNF13O43567 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF13O43567 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF13O43567 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF13O43567 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF13O43567 AL022069.1-201ENST00000568025 1636 ntBASIC20.64■□□□□ 0.9
RNF13O43567 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF13O43567 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF13O43567 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF13O43567 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF13O43567 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RNF13O43567 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF13O43567 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF13O43567 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF13O43567 AL161729.1-201ENST00000604104 1402 ntBASIC20.63■□□□□ 0.89
RNF13O43567 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF13O43567 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF13O43567 KRT18P24-201ENST00000344739 1156 ntBASIC20.63■□□□□ 0.89
RNF13O43567 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
RNF13O43567 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF13O43567 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF13O43567 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF13O43567 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF13O43567 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF13O43567 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF13O43567 KRT8P33-201ENST00000508125 1423 ntBASIC20.62■□□□□ 0.89
RNF13O43567 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
RNF13O43567 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF13O43567 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RNF13O43567 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF13O43567 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF13O43567 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
RNF13O43567 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF13O43567 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF13O43567 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RNF13O43567 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF13O43567 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF13O43567 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RNF13O43567 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF13O43567 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF13O43567 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF13O43567 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF13O43567 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF13O43567 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RNF13O43567 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RNF13O43567 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF13O43567 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF13O43567 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.61■□□□□ 0.89
RNF13O43567 MIR4508-201ENST00000584178 70 ntBASIC20.61■□□□□ 0.89
RNF13O43567 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF13O43567 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF13O43567 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF13O43567 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF13O43567 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF13O43567 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF13O43567 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF13O43567 YBX1P4-201ENST00000392794 808 ntBASIC20.6■□□□□ 0.89
RNF13O43567 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RNF13O43567 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.6■□□□□ 0.89
RNF13O43567 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.6■□□□□ 0.89
RNF13O43567 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF13O43567 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF13O43567 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF13O43567 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF13O43567 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF13O43567 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF13O43567 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF13O43567 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF13O43567 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF13O43567 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF13O43567 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF13O43567 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF13O43567 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF13O43567 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF13O43567 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF13O43567 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF13O43567 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
RNF13O43567 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF13O43567 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF13O43567 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.58■□□□□ 0.89
RNF13O43567 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF13O43567 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF13O43567 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.58■□□□□ 0.89
RNF13O43567 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.58■□□□□ 0.89
RNF13O43567 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF13O43567 MIR4281-201ENST00000580852 62 ntBASIC20.58■□□□□ 0.89
RNF13O43567 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF13O43567 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms