Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.14e-6■□□□□ 9.6
EIF3DO15371 DST-222ENST00000520645 4598 ntTSL 26.37□□□□□ -1.394e-7■□□□□ 9.6
EIF3DO15371 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.543e-9■□□□□ 9.6
EIF3DO15371 ASPSCR1-204ENST00000577733 5503 ntTSL 217.77■□□□□ 0.447e-10■□□□□ 9.6
EIF3DO15371 ATP5E-202ENST00000395659 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.51e-25■□□□□ 9.6
EIF3DO15371 ATP5E-201ENST00000243997 3665 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.941e-25■□□□□ 9.6
EIF3DO15371 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.21e-25■□□□□ 9.6
EIF3DO15371 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.353e-6■□□□□ 9.6
EIF3DO15371 SH3D21-202ENST00000474766 2043 ntTSL 1 (best)22.85■■□□□ 1.259e-9■□□□□ 9.6
EIF3DO15371 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.52■■□□□ 1.041e-6■□□□□ 9.6
EIF3DO15371 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.37■□□□□ 0.859e-7■□□□□ 9.6
EIF3DO15371 MARF1-206ENST00000548216 2529 ntTSL 520.08■□□□□ 0.89e-7■□□□□ 9.6
EIF3DO15371 SH3D21-203ENST00000480549 3182 ntTSL 218.38■□□□□ 0.539e-9■□□□□ 9.6
EIF3DO15371 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.06■□□□□ 0.489e-9■□□□□ 9.6
EIF3DO15371 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.441e-6■□□□□ 9.6
EIF3DO15371 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.96■□□□□ 0.319e-7■□□□□ 9.6
EIF3DO15371 OSBPL8-214ENST00000551927 531 ntTSL 216.6■□□□□ 0.259e-7■□□□□ 9.6
EIF3DO15371 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.51■□□□□ 0.231e-6■□□□□ 9.6
EIF3DO15371 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.22■□□□□ 0.191e-6■□□□□ 9.6
EIF3DO15371 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.159e-7■□□□□ 9.6
EIF3DO15371 MARF1-205ENST00000548025 5891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.539e-7■□□□□ 9.6
EIF3DO15371 AGAP1-212ENST00000614409 9932 ntTSL 5 BASIC11.55□□□□□ -0.569e-7■□□□□ 9.6
EIF3DO15371 MARF1-207ENST00000549219 581 ntTSL 511.28□□□□□ -0.69e-7■□□□□ 9.6
EIF3DO15371 AGAP1-207ENST00000428334 10090 ntTSL 5 BASIC10.83□□□□□ -0.689e-7■□□□□ 9.6
EIF3DO15371 KANK1-210ENST00000619269 5688 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.729e-9■□□□□ 9.6
EIF3DO15371 MARF1-214ENST00000552553 5053 ntTSL 510.52□□□□□ -0.739e-7■□□□□ 9.6
EIF3DO15371 KANK1-206ENST00000382303 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.759e-9■□□□□ 9.6
EIF3DO15371 KANK1-209ENST00000489369 7193 ntTSL 510.18□□□□□ -0.789e-9■□□□□ 9.6
EIF3DO15371 MARF1-211ENST00000551742 5900 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.89e-7■□□□□ 9.6
EIF3DO15371 MARF1-202ENST00000540441 7105 ntTSL 5 BASIC9.93□□□□□ -0.829e-7■□□□□ 9.6
EIF3DO15371 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.849e-9■□□□□ 9.6
EIF3DO15371 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.999e-7■□□□□ 9.6
EIF3DO15371 KANK1-201ENST00000354485 6912 ntTSL 28.45□□□□□ -1.069e-9■□□□□ 9.6
EIF3DO15371 MGEA5-209ENST00000482611 1664 ntTSL 1 (best)6.8□□□□□ -1.321e-6■□□□□ 9.6
EIF3DO15371 LUC7L3-221ENST00000513025 594 ntTSL 34.93□□□□□ -1.629e-7■□□□□ 9.6
EIF3DO15371 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.86□□□□□ -1.639e-7■□□□□ 9.6
EIF3DO15371 CHD9-201ENST00000219084 8739 ntTSL 1 (best)4.85□□□□□ -1.639e-7■□□□□ 9.6
EIF3DO15371 CHD9-214ENST00000565119 824 ntTSL 34.54□□□□□ -1.689e-7■□□□□ 9.6
EIF3DO15371 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.729e-7■□□□□ 9.6
EIF3DO15371 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.819e-7■□□□□ 9.6
EIF3DO15371 LUC7L3-211ENST00000507503 561 ntTSL 23.68□□□□□ -1.829e-7■□□□□ 9.6
EIF3DO15371 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.38□□□□□ -1.879e-7■□□□□ 9.6
EIF3DO15371 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.29□□□□□ -1.889e-7■□□□□ 9.6
EIF3DO15371 CHD9-216ENST00000565803 3625 ntTSL 53.12□□□□□ -1.919e-7■□□□□ 9.6
EIF3DO15371 CHD9-207ENST00000562806 400 ntTSL 32.83□□□□□ -1.969e-7■□□□□ 9.6
EIF3DO15371 CHD9-209ENST00000564255 2896 ntTSL 52.46□□□□□ -2.029e-7■□□□□ 9.6
EIF3DO15371 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.893e-7■□□□□ 9.5
EIF3DO15371 C20orf27-203ENST00000399672 1734 ntAPPRIS P1 TSL 228.57■■■□□ 2.162e-10■□□□□ 9.5
EIF3DO15371 COL27A1-208ENST00000494780 514 ntTSL 424.88■■□□□ 1.579e-9■□□□□ 9.5
EIF3DO15371 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.562e-10■□□□□ 9.5
EIF3DO15371 AKAP1-215ENST00000575186 578 ntTSL 422.51■■□□□ 1.192e-6■□□□□ 9.5
EIF3DO15371 HNRNPM-207ENST00000597081 1004 ntTSL 521.82■■□□□ 1.081e-7■□□□□ 9.5
EIF3DO15371 HNRNPM-208ENST00000597270 1147 ntTSL 221.71■■□□□ 1.071e-7■□□□□ 9.5
EIF3DO15371 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.052e-6■□□□□ 9.5
EIF3DO15371 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.21■□□□□ 0.992e-10■□□□□ 9.5
EIF3DO15371 SLC35B1-209ENST00000507773 1320 ntTSL 521.16■□□□□ 0.982e-6■□□□□ 9.5
EIF3DO15371 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.922e-8■□□□□ 9.5
EIF3DO15371 AKAP1-205ENST00000570423 568 ntTSL 420.72■□□□□ 0.912e-6■□□□□ 9.5
EIF3DO15371 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.65■□□□□ 0.92e-8■□□□□ 9.5
EIF3DO15371 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.896e-15■□□□□ 9.5
EIF3DO15371 SLC35B1-202ENST00000435059 910 ntTSL 220.38■□□□□ 0.852e-6■□□□□ 9.5
EIF3DO15371 SLC35B1-219ENST00000515850 862 ntTSL 519.91■□□□□ 0.782e-6■□□□□ 9.5
EIF3DO15371 SFSWAP-207ENST00000538548 2636 ntTSL 519.85■□□□□ 0.772e-6■□□□□ 9.5
EIF3DO15371 SLC35B1-214ENST00000509781 806 ntTSL 219.69■□□□□ 0.742e-6■□□□□ 9.5
EIF3DO15371 CANT1-203ENST00000586916 769 ntTSL 319.23■□□□□ 0.672e-6■□□□□ 9.5
EIF3DO15371 CANT1-213ENST00000592033 502 ntTSL 219.23■□□□□ 0.672e-6■□□□□ 9.5
EIF3DO15371 SFSWAP-203ENST00000535236 5593 ntTSL 1 (best)18.99■□□□□ 0.632e-6■□□□□ 9.5
EIF3DO15371 DHX16-203ENST00000415603 892 ntTSL 318.92■□□□□ 0.622e-6■□□□□ 9.5
EIF3DO15371 MRPL3-210ENST00000512877 659 ntTSL 318.81■□□□□ 0.62e-8■□□□□ 9.5
EIF3DO15371 MRPL3-209ENST00000511168 1377 ntTSL 218.8■□□□□ 0.62e-8■□□□□ 9.5
EIF3DO15371 SLC35B1-216ENST00000511763 581 ntTSL 318.79■□□□□ 0.62e-6■□□□□ 9.5
EIF3DO15371 SFSWAP-205ENST00000537164 961 ntTSL 518.67■□□□□ 0.582e-6■□□□□ 9.5
EIF3DO15371 LAMA5-208ENST00000474128 579 ntTSL 318.46■□□□□ 0.552e-8■□□□□ 9.5
EIF3DO15371 SEPT9-241ENST00000591934 553 ntTSL 418.42■□□□□ 0.545e-7■□□□□ 9.5
EIF3DO15371 CANT1-215ENST00000592887 555 ntTSL 418.28■□□□□ 0.522e-6■□□□□ 9.5
EIF3DO15371 CANT1-212ENST00000591811 466 ntTSL 218.11■□□□□ 0.492e-6■□□□□ 9.5
EIF3DO15371 AKAP1-211ENST00000573085 484 ntTSL 418.1■□□□□ 0.492e-6■□□□□ 9.5
EIF3DO15371 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.472e-6■□□□□ 9.5
EIF3DO15371 RASA1-206ENST00000515800 4979 ntTSL 1 (best)17.71■□□□□ 0.432e-6■□□□□ 9.5
EIF3DO15371 FAM169A-205ENST00000513277 803 ntTSL 317.61■□□□□ 0.412e-6■□□□□ 9.5
EIF3DO15371 SEPT9-231ENST00000590595 569 ntTSL 317.49■□□□□ 0.395e-7■□□□□ 9.5
EIF3DO15371 AKAP1-213ENST00000574683 588 ntTSL 217.37■□□□□ 0.372e-6■□□□□ 9.5
EIF3DO15371 CANT1-205ENST00000588075 881 ntTSL 217.25■□□□□ 0.352e-6■□□□□ 9.5
EIF3DO15371 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.282e-6■□□□□ 9.5
EIF3DO15371 CANT1-209ENST00000591625 599 ntTSL 416.69■□□□□ 0.262e-6■□□□□ 9.5
EIF3DO15371 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.242e-6■□□□□ 9.5
EIF3DO15371 SLC35B1-204ENST00000502406 1477 ntTSL 216.14■□□□□ 0.172e-6■□□□□ 9.5
EIF3DO15371 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.176e-15■□□□□ 9.5
EIF3DO15371 CANT1-214ENST00000592228 1546 ntTSL 516.07■□□□□ 0.162e-6■□□□□ 9.5
EIF3DO15371 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.082e-6■□□□□ 9.5
EIF3DO15371 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.022e-6■□□□□ 9.5
EIF3DO15371 SLC38A10-204ENST00000539748 528 ntTSL 315.16■□□□□ 0.026e-15■□□□□ 9.5
EIF3DO15371 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.012e-6■□□□□ 9.5
EIF3DO15371 MRPL3-205ENST00000507669 848 ntTSL 314.97□□□□□ -0.012e-8■□□□□ 9.5
EIF3DO15371 MRPL3-208ENST00000510923 813 ntTSL 214.97□□□□□ -0.012e-8■□□□□ 9.5
EIF3DO15371 CANT1-208ENST00000590370 614 ntTSL 214.92□□□□□ -0.022e-6■□□□□ 9.5
EIF3DO15371 SEPT9-242ENST00000592098 503 ntTSL 414.53□□□□□ -0.085e-7■□□□□ 9.5
EIF3DO15371 FAM169A-204ENST00000510609 5908 ntTSL 1 (best)14.39□□□□□ -0.112e-6■□□□□ 9.5
EIF3DO15371 SLC35B1-205ENST00000503334 943 ntTSL 314.07□□□□□ -0.162e-6■□□□□ 9.5
EIF3DO15371 CANT1-201ENST00000302345 3534 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.312e-6■□□□□ 9.5
Retrieved 100 of 4,069 protein–RNA pairs in 17.5 ms