Protein–RNA interactions for Protein: B2RD01

CENPBD1, CENPB DNA-binding domain-containing protein 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPBD1B2RD01 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CENPBD1B2RD01 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CENPBD1B2RD01 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CENPBD1B2RD01 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CENPBD1B2RD01 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
CENPBD1B2RD01 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CENPBD1B2RD01 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.6■□□□□ 0.89
CENPBD1B2RD01 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.6■□□□□ 0.89
CENPBD1B2RD01 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.6■□□□□ 0.89
CENPBD1B2RD01 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.6■□□□□ 0.89
CENPBD1B2RD01 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CENPBD1B2RD01 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
CENPBD1B2RD01 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CENPBD1B2RD01 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CENPBD1B2RD01 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.59■□□□□ 0.89
CENPBD1B2RD01 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CENPBD1B2RD01 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CENPBD1B2RD01 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CENPBD1B2RD01 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CENPBD1B2RD01 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CENPBD1B2RD01 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CENPBD1B2RD01 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CENPBD1B2RD01 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.59■□□□□ 0.89
CENPBD1B2RD01 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.59■□□□□ 0.89
CENPBD1B2RD01 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CENPBD1B2RD01 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CENPBD1B2RD01 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
CENPBD1B2RD01 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CENPBD1B2RD01 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CENPBD1B2RD01 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.59■□□□□ 0.89
CENPBD1B2RD01 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.58■□□□□ 0.89
CENPBD1B2RD01 AC004812.2-201ENST00000611079 2094 ntBASIC20.58■□□□□ 0.89
CENPBD1B2RD01 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CENPBD1B2RD01 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CENPBD1B2RD01 KRT18P24-201ENST00000344739 1156 ntBASIC20.58■□□□□ 0.89
CENPBD1B2RD01 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CENPBD1B2RD01 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CENPBD1B2RD01 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CENPBD1B2RD01 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CENPBD1B2RD01 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CENPBD1B2RD01 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CENPBD1B2RD01 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CENPBD1B2RD01 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
CENPBD1B2RD01 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.57■□□□□ 0.88
CENPBD1B2RD01 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CENPBD1B2RD01 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CENPBD1B2RD01 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
CENPBD1B2RD01 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CENPBD1B2RD01 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CENPBD1B2RD01 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.57■□□□□ 0.88
CENPBD1B2RD01 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CENPBD1B2RD01 MIR4508-201ENST00000584178 70 ntBASIC20.57■□□□□ 0.88
CENPBD1B2RD01 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.57■□□□□ 0.88
CENPBD1B2RD01 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CENPBD1B2RD01 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CENPBD1B2RD01 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.56■□□□□ 0.88
CENPBD1B2RD01 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CENPBD1B2RD01 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.56■□□□□ 0.88
CENPBD1B2RD01 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CENPBD1B2RD01 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.56■□□□□ 0.88
CENPBD1B2RD01 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CENPBD1B2RD01 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CENPBD1B2RD01 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CENPBD1B2RD01 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CENPBD1B2RD01 AL033527.3-201ENST00000566366 1196 ntBASIC20.56■□□□□ 0.88
CENPBD1B2RD01 PVT1_1.1-201ENST00000615125 194 ntBASIC20.56■□□□□ 0.88
CENPBD1B2RD01 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CENPBD1B2RD01 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
CENPBD1B2RD01 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CENPBD1B2RD01 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CENPBD1B2RD01 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.56■□□□□ 0.88
CENPBD1B2RD01 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CENPBD1B2RD01 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.55■□□□□ 0.88
CENPBD1B2RD01 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CENPBD1B2RD01 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.55■□□□□ 0.88
CENPBD1B2RD01 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.55■□□□□ 0.88
CENPBD1B2RD01 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.55■□□□□ 0.88
CENPBD1B2RD01 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.55■□□□□ 0.88
CENPBD1B2RD01 AC010980.1-201ENST00000587192 1142 ntBASIC20.55■□□□□ 0.88
CENPBD1B2RD01 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CENPBD1B2RD01 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CENPBD1B2RD01 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CENPBD1B2RD01 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.55■□□□□ 0.88
CENPBD1B2RD01 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CENPBD1B2RD01 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CENPBD1B2RD01 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CENPBD1B2RD01 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.54■□□□□ 0.88
CENPBD1B2RD01 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CENPBD1B2RD01 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CENPBD1B2RD01 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.54■□□□□ 0.88
CENPBD1B2RD01 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.54■□□□□ 0.88
CENPBD1B2RD01 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.54■□□□□ 0.88
CENPBD1B2RD01 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.54■□□□□ 0.88
CENPBD1B2RD01 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CENPBD1B2RD01 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CENPBD1B2RD01 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CENPBD1B2RD01 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CENPBD1B2RD01 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CENPBD1B2RD01 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.53■□□□□ 0.88
CENPBD1B2RD01 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms