Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CLCA1A8K7I4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLCA1A8K7I4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.19■□□□□ 0.98
CLCA1A8K7I4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLCA1A8K7I4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLCA1A8K7I4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.18■□□□□ 0.98
CLCA1A8K7I4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLCA1A8K7I4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.18■□□□□ 0.98
CLCA1A8K7I4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLCA1A8K7I4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.18■□□□□ 0.98
CLCA1A8K7I4 MIR6089-201ENST00000616698 64 ntBASIC21.18■□□□□ 0.98
CLCA1A8K7I4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLCA1A8K7I4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLCA1A8K7I4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLCA1A8K7I4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLCA1A8K7I4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLCA1A8K7I4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CLCA1A8K7I4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.17■□□□□ 0.98
CLCA1A8K7I4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CLCA1A8K7I4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.17■□□□□ 0.98
CLCA1A8K7I4 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.17■□□□□ 0.98
CLCA1A8K7I4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.17■□□□□ 0.98
CLCA1A8K7I4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.17■□□□□ 0.98
CLCA1A8K7I4 AL117328.2-201ENST00000624617 1940 ntBASIC21.17■□□□□ 0.98
CLCA1A8K7I4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLCA1A8K7I4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLCA1A8K7I4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLCA1A8K7I4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCA1A8K7I4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLCA1A8K7I4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCA1A8K7I4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCA1A8K7I4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLCA1A8K7I4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CLCA1A8K7I4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CLCA1A8K7I4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.16■□□□□ 0.98
CLCA1A8K7I4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCA1A8K7I4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.16■□□□□ 0.98
CLCA1A8K7I4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CLCA1A8K7I4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLCA1A8K7I4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLCA1A8K7I4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.15■□□□□ 0.98
CLCA1A8K7I4 GUSBP5-201ENST00000418136 578 ntBASIC21.15■□□□□ 0.98
CLCA1A8K7I4 AC239859.2-201ENST00000444165 318 ntBASIC21.15■□□□□ 0.98
CLCA1A8K7I4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.15■□□□□ 0.98
CLCA1A8K7I4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.15■□□□□ 0.98
CLCA1A8K7I4 AC131212.1-201ENST00000613771 668 ntBASIC21.15■□□□□ 0.98
CLCA1A8K7I4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.15■□□□□ 0.98
CLCA1A8K7I4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
CLCA1A8K7I4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLCA1A8K7I4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.15■□□□□ 0.98
CLCA1A8K7I4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
CLCA1A8K7I4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.14■□□□□ 0.98
CLCA1A8K7I4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLCA1A8K7I4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLCA1A8K7I4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
CLCA1A8K7I4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
CLCA1A8K7I4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.14■□□□□ 0.97
CLCA1A8K7I4 Z92544.1-202ENST00000571933 1220 ntBASIC21.14■□□□□ 0.97
CLCA1A8K7I4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
CLCA1A8K7I4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLCA1A8K7I4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLCA1A8K7I4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCA1A8K7I4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCA1A8K7I4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLCA1A8K7I4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLCA1A8K7I4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCA1A8K7I4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCA1A8K7I4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.13■□□□□ 0.97
CLCA1A8K7I4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CLCA1A8K7I4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CLCA1A8K7I4 FOXO3B-201ENST00000395675 1928 ntBASIC21.13■□□□□ 0.97
CLCA1A8K7I4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLCA1A8K7I4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.12■□□□□ 0.97
CLCA1A8K7I4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCA1A8K7I4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CLCA1A8K7I4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCA1A8K7I4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCA1A8K7I4 BX664725.1-201ENST00000438252 379 ntBASIC21.12■□□□□ 0.97
CLCA1A8K7I4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCA1A8K7I4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CLCA1A8K7I4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCA1A8K7I4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCA1A8K7I4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCA1A8K7I4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.12■□□□□ 0.97
CLCA1A8K7I4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.11■□□□□ 0.97
CLCA1A8K7I4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CLCA1A8K7I4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLCA1A8K7I4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CLCA1A8K7I4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLCA1A8K7I4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CLCA1A8K7I4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CLCA1A8K7I4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
CLCA1A8K7I4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.11■□□□□ 0.97
CLCA1A8K7I4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLCA1A8K7I4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLCA1A8K7I4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLCA1A8K7I4 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLCA1A8K7I4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLCA1A8K7I4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.11■□□□□ 0.97
CLCA1A8K7I4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms