Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHISA3A0PJX4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHISA3A0PJX4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHISA3A0PJX4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SHISA3A0PJX4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.96■□□□□ 0.79
SHISA3A0PJX4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
SHISA3A0PJX4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHISA3A0PJX4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHISA3A0PJX4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.95■□□□□ 0.78
SHISA3A0PJX4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.95■□□□□ 0.78
SHISA3A0PJX4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.95■□□□□ 0.78
SHISA3A0PJX4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHISA3A0PJX4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.95■□□□□ 0.78
SHISA3A0PJX4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SHISA3A0PJX4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SHISA3A0PJX4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHISA3A0PJX4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHISA3A0PJX4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHISA3A0PJX4 AL137060.1-201ENST00000618151 2648 ntBASIC19.94■□□□□ 0.78
SHISA3A0PJX4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHISA3A0PJX4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SHISA3A0PJX4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SHISA3A0PJX4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.94■□□□□ 0.78
SHISA3A0PJX4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.94■□□□□ 0.78
SHISA3A0PJX4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHISA3A0PJX4 AC092296.2-201ENST00000589470 999 ntBASIC19.94■□□□□ 0.78
SHISA3A0PJX4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHISA3A0PJX4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SHISA3A0PJX4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SHISA3A0PJX4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHISA3A0PJX4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
SHISA3A0PJX4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHISA3A0PJX4 RP9P-202ENST00000450133 1212 ntBASIC19.93■□□□□ 0.78
SHISA3A0PJX4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHISA3A0PJX4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHISA3A0PJX4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHISA3A0PJX4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHISA3A0PJX4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SHISA3A0PJX4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHISA3A0PJX4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.93■□□□□ 0.78
SHISA3A0PJX4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.93■□□□□ 0.78
SHISA3A0PJX4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHISA3A0PJX4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHISA3A0PJX4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SHISA3A0PJX4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.92■□□□□ 0.78
SHISA3A0PJX4 AC093536.1-201ENST00000569153 554 ntBASIC19.92■□□□□ 0.78
SHISA3A0PJX4 MIR3648-2-201ENST00000581792 180 ntBASIC19.92■□□□□ 0.78
SHISA3A0PJX4 MIR3648-1-201ENST00000615959 180 ntBASIC19.92■□□□□ 0.78
SHISA3A0PJX4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.92■□□□□ 0.78
SHISA3A0PJX4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
SHISA3A0PJX4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHISA3A0PJX4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SHISA3A0PJX4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SHISA3A0PJX4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHISA3A0PJX4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHISA3A0PJX4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHISA3A0PJX4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.91■□□□□ 0.78
SHISA3A0PJX4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.91■□□□□ 0.78
SHISA3A0PJX4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SHISA3A0PJX4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHISA3A0PJX4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SHISA3A0PJX4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.91■□□□□ 0.78
SHISA3A0PJX4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHISA3A0PJX4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SHISA3A0PJX4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SHISA3A0PJX4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHISA3A0PJX4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.9■□□□□ 0.78
SHISA3A0PJX4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHISA3A0PJX4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.9■□□□□ 0.78
SHISA3A0PJX4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.9■□□□□ 0.78
SHISA3A0PJX4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHISA3A0PJX4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.9■□□□□ 0.78
SHISA3A0PJX4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.9■□□□□ 0.78
SHISA3A0PJX4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SHISA3A0PJX4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SHISA3A0PJX4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
SHISA3A0PJX4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
SHISA3A0PJX4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHISA3A0PJX4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SHISA3A0PJX4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.89■□□□□ 0.77
SHISA3A0PJX4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SHISA3A0PJX4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.89■□□□□ 0.77
SHISA3A0PJX4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.89■□□□□ 0.77
SHISA3A0PJX4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.89■□□□□ 0.77
SHISA3A0PJX4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SHISA3A0PJX4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SHISA3A0PJX4 AL161729.1-201ENST00000604104 1402 ntBASIC19.88■□□□□ 0.77
SHISA3A0PJX4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SHISA3A0PJX4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.88■□□□□ 0.77
SHISA3A0PJX4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SHISA3A0PJX4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SHISA3A0PJX4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SHISA3A0PJX4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
SHISA3A0PJX4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.87■□□□□ 0.77
SHISA3A0PJX4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SHISA3A0PJX4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SHISA3A0PJX4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.87■□□□□ 0.77
SHISA3A0PJX4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SHISA3A0PJX4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SHISA3A0PJX4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms