Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV20A0A0B4J274 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV20A0A0B4J274 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAV20A0A0B4J274 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.22■□□□□ 0.67
TRAV20A0A0B4J274 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.22■□□□□ 0.67
TRAV20A0A0B4J274 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.22■□□□□ 0.67
TRAV20A0A0B4J274 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.22■□□□□ 0.67
TRAV20A0A0B4J274 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAV20A0A0B4J274 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV20A0A0B4J274 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TRAV20A0A0B4J274 AC010501.1-201ENST00000606270 1962 ntBASIC19.22■□□□□ 0.67
TRAV20A0A0B4J274 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV20A0A0B4J274 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV20A0A0B4J274 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
TRAV20A0A0B4J274 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.21■□□□□ 0.67
TRAV20A0A0B4J274 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRAV20A0A0B4J274 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV20A0A0B4J274 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV20A0A0B4J274 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV20A0A0B4J274 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV20A0A0B4J274 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV20A0A0B4J274 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.21■□□□□ 0.67
TRAV20A0A0B4J274 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TRAV20A0A0B4J274 MIR638-201ENST00000385237 100 ntBASIC19.21■□□□□ 0.67
TRAV20A0A0B4J274 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.21■□□□□ 0.67
TRAV20A0A0B4J274 SNX5-217ENST00000606557 1087 ntBASIC19.21■□□□□ 0.67
TRAV20A0A0B4J274 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.21■□□□□ 0.67
TRAV20A0A0B4J274 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TRAV20A0A0B4J274 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV20A0A0B4J274 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.21■□□□□ 0.67
TRAV20A0A0B4J274 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRAV20A0A0B4J274 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.21■□□□□ 0.67
TRAV20A0A0B4J274 AL121603.2-201ENST00000557373 2117 ntBASIC19.21■□□□□ 0.67
TRAV20A0A0B4J274 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.21■□□□□ 0.67
TRAV20A0A0B4J274 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
TRAV20A0A0B4J274 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TRAV20A0A0B4J274 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAV20A0A0B4J274 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TRAV20A0A0B4J274 ERN1-208ENST00000606895 2068 ntBASIC19.2■□□□□ 0.66
TRAV20A0A0B4J274 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRAV20A0A0B4J274 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TRAV20A0A0B4J274 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.2■□□□□ 0.66
TRAV20A0A0B4J274 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.2■□□□□ 0.66
TRAV20A0A0B4J274 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TRAV20A0A0B4J274 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.2■□□□□ 0.66
TRAV20A0A0B4J274 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.2■□□□□ 0.66
TRAV20A0A0B4J274 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRAV20A0A0B4J274 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV20A0A0B4J274 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.18■□□□□ 0.66
TRAV20A0A0B4J274 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV20A0A0B4J274 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TRAV20A0A0B4J274 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV20A0A0B4J274 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
TRAV20A0A0B4J274 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.18■□□□□ 0.66
TRAV20A0A0B4J274 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
TRAV20A0A0B4J274 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
TRAV20A0A0B4J274 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
TRAV20A0A0B4J274 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRAV20A0A0B4J274 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
TRAV20A0A0B4J274 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV20A0A0B4J274 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV20A0A0B4J274 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
TRAV20A0A0B4J274 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TRAV20A0A0B4J274 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV20A0A0B4J274 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRAV20A0A0B4J274 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TRAV20A0A0B4J274 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.17■□□□□ 0.66
TRAV20A0A0B4J274 AL512631.2-201ENST00000604634 923 ntBASIC19.17■□□□□ 0.66
TRAV20A0A0B4J274 MIR4466-201ENST00000606121 54 ntBASIC19.17■□□□□ 0.66
TRAV20A0A0B4J274 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
TRAV20A0A0B4J274 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV20A0A0B4J274 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV20A0A0B4J274 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV20A0A0B4J274 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TRAV20A0A0B4J274 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV20A0A0B4J274 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV20A0A0B4J274 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV20A0A0B4J274 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV20A0A0B4J274 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.16■□□□□ 0.66
TRAV20A0A0B4J274 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRAV20A0A0B4J274 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV20A0A0B4J274 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV20A0A0B4J274 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.15■□□□□ 0.66
TRAV20A0A0B4J274 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV20A0A0B4J274 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV20A0A0B4J274 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV20A0A0B4J274 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.15■□□□□ 0.66
TRAV20A0A0B4J274 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.14■□□□□ 0.66
TRAV20A0A0B4J274 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRAV20A0A0B4J274 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV20A0A0B4J274 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV20A0A0B4J274 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV20A0A0B4J274 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.14■□□□□ 0.65
TRAV20A0A0B4J274 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV20A0A0B4J274 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV20A0A0B4J274 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV20A0A0B4J274 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV20A0A0B4J274 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV20A0A0B4J274 AC068473.5-201ENST00000616428 2072 ntBASIC19.13■□□□□ 0.65
TRAV20A0A0B4J274 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms