Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV18A0A075B6X5 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV18A0A075B6X5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
TRAV18A0A075B6X5 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV18A0A075B6X5 KRT18P10-201ENST00000388836 1287 ntBASIC19.55■□□□□ 0.72
TRAV18A0A075B6X5 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV18A0A075B6X5 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV18A0A075B6X5 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.55■□□□□ 0.72
TRAV18A0A075B6X5 AC092296.2-201ENST00000589470 999 ntBASIC19.55■□□□□ 0.72
TRAV18A0A075B6X5 AC016575.1-201ENST00000607026 382 ntBASIC19.55■□□□□ 0.72
TRAV18A0A075B6X5 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.55■□□□□ 0.72
TRAV18A0A075B6X5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.55■□□□□ 0.72
TRAV18A0A075B6X5 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV18A0A075B6X5 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV18A0A075B6X5 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV18A0A075B6X5 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TRAV18A0A075B6X5 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV18A0A075B6X5 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV18A0A075B6X5 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV18A0A075B6X5 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV18A0A075B6X5 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV18A0A075B6X5 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV18A0A075B6X5 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV18A0A075B6X5 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV18A0A075B6X5 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV18A0A075B6X5 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
TRAV18A0A075B6X5 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
TRAV18A0A075B6X5 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
TRAV18A0A075B6X5 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.53■□□□□ 0.72
TRAV18A0A075B6X5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV18A0A075B6X5 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV18A0A075B6X5 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV18A0A075B6X5 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TRAV18A0A075B6X5 ECEL1P2-201ENST00000461596 1295 ntBASIC19.52■□□□□ 0.72
TRAV18A0A075B6X5 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.52■□□□□ 0.72
TRAV18A0A075B6X5 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TRAV18A0A075B6X5 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.52■□□□□ 0.72
TRAV18A0A075B6X5 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.52■□□□□ 0.72
TRAV18A0A075B6X5 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.52■□□□□ 0.72
TRAV18A0A075B6X5 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TRAV18A0A075B6X5 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV18A0A075B6X5 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV18A0A075B6X5 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV18A0A075B6X5 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.52■□□□□ 0.71
TRAV18A0A075B6X5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.52■□□□□ 0.71
TRAV18A0A075B6X5 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV18A0A075B6X5 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.51■□□□□ 0.71
TRAV18A0A075B6X5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.51■□□□□ 0.71
TRAV18A0A075B6X5 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV18A0A075B6X5 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV18A0A075B6X5 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
TRAV18A0A075B6X5 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV18A0A075B6X5 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV18A0A075B6X5 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.51■□□□□ 0.71
TRAV18A0A075B6X5 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV18A0A075B6X5 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.5■□□□□ 0.71
TRAV18A0A075B6X5 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV18A0A075B6X5 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV18A0A075B6X5 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV18A0A075B6X5 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
TRAV18A0A075B6X5 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.5■□□□□ 0.71
TRAV18A0A075B6X5 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.5■□□□□ 0.71
TRAV18A0A075B6X5 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV18A0A075B6X5 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.49■□□□□ 0.71
TRAV18A0A075B6X5 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.49■□□□□ 0.71
TRAV18A0A075B6X5 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV18A0A075B6X5 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TRAV18A0A075B6X5 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV18A0A075B6X5 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV18A0A075B6X5 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TRAV18A0A075B6X5 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TRAV18A0A075B6X5 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV18A0A075B6X5 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV18A0A075B6X5 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV18A0A075B6X5 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.49■□□□□ 0.71
TRAV18A0A075B6X5 AC127496.7-201ENST00000625110 1798 ntBASIC19.49■□□□□ 0.71
TRAV18A0A075B6X5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV18A0A075B6X5 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV18A0A075B6X5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV18A0A075B6X5 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV18A0A075B6X5 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.48■□□□□ 0.71
TRAV18A0A075B6X5 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV18A0A075B6X5 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV18A0A075B6X5 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TRAV18A0A075B6X5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV18A0A075B6X5 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV18A0A075B6X5 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TRAV18A0A075B6X5 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV18A0A075B6X5 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV18A0A075B6X5 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.48■□□□□ 0.71
TRAV18A0A075B6X5 ECEL1P1-201ENST00000373592 1742 ntBASIC19.48■□□□□ 0.71
TRAV18A0A075B6X5 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV18A0A075B6X5 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV18A0A075B6X5 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV18A0A075B6X5 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRAV18A0A075B6X5 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV18A0A075B6X5 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV18A0A075B6X5 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV18A0A075B6X5 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV18A0A075B6X5 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms