Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IGKV2-28A0A075B6P5 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC15.03■□□□□ -0
IGKV2-28A0A075B6P5 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IGKV2-28A0A075B6P5 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC15.03■□□□□ -0
IGKV2-28A0A075B6P5 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IGKV2-28A0A075B6P5 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC15.03■□□□□ -0
IGKV2-28A0A075B6P5 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
IGKV2-28A0A075B6P5 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IGKV2-28A0A075B6P5 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IGKV2-28A0A075B6P5 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
IGKV2-28A0A075B6P5 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IGKV2-28A0A075B6P5 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC15.03■□□□□ -0
IGKV2-28A0A075B6P5 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC15.03■□□□□ -0
IGKV2-28A0A075B6P5 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
IGKV2-28A0A075B6P5 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IGKV2-28A0A075B6P5 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IGKV2-28A0A075B6P5 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC15.03■□□□□ -0
IGKV2-28A0A075B6P5 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
IGKV2-28A0A075B6P5 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IGKV2-28A0A075B6P5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC15.02■□□□□ -0
IGKV2-28A0A075B6P5 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC15.02■□□□□ -0
IGKV2-28A0A075B6P5 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC15.02■□□□□ -0
IGKV2-28A0A075B6P5 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
IGKV2-28A0A075B6P5 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC15.02■□□□□ -0
IGKV2-28A0A075B6P5 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IGKV2-28A0A075B6P5 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
IGKV2-28A0A075B6P5 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC15.02■□□□□ -0
IGKV2-28A0A075B6P5 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC15.02■□□□□ -0
IGKV2-28A0A075B6P5 TPT1-202ENST00000379055 948 ntTSL 2 BASIC15.02■□□□□ -0
IGKV2-28A0A075B6P5 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
IGKV2-28A0A075B6P5 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC15.02■□□□□ -0
IGKV2-28A0A075B6P5 AL157400.5-201ENST00000507624 621 ntBASIC15.02■□□□□ -0
IGKV2-28A0A075B6P5 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC15.02■□□□□ -0
IGKV2-28A0A075B6P5 MIR7108-201ENST00000614319 87 ntBASIC15.02■□□□□ -0
IGKV2-28A0A075B6P5 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC15.02■□□□□ -0
IGKV2-28A0A075B6P5 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC15.02■□□□□ -0
IGKV2-28A0A075B6P5 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
IGKV2-28A0A075B6P5 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
IGKV2-28A0A075B6P5 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
IGKV2-28A0A075B6P5 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
IGKV2-28A0A075B6P5 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
IGKV2-28A0A075B6P5 ECEL1P1-201ENST00000373592 1742 ntBASIC15.02□□□□□ -0.01
IGKV2-28A0A075B6P5 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC15.02□□□□□ -0.01
IGKV2-28A0A075B6P5 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
IGKV2-28A0A075B6P5 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
IGKV2-28A0A075B6P5 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV2-28A0A075B6P5 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV2-28A0A075B6P5 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC15.01□□□□□ -0.01
IGKV2-28A0A075B6P5 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV2-28A0A075B6P5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC15.01□□□□□ -0.01
IGKV2-28A0A075B6P5 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
IGKV2-28A0A075B6P5 MOB2-207ENST00000614710 705 ntTSL 5 BASIC15.01□□□□□ -0.01
IGKV2-28A0A075B6P5 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC15.01□□□□□ -0.01
IGKV2-28A0A075B6P5 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV2-28A0A075B6P5 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV2-28A0A075B6P5 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV2-28A0A075B6P5 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV2-28A0A075B6P5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV2-28A0A075B6P5 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
IGKV2-28A0A075B6P5 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IGKV2-28A0A075B6P5 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
IGKV2-28A0A075B6P5 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
IGKV2-28A0A075B6P5 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC15□□□□□ -0.01
IGKV2-28A0A075B6P5 AC060814.1-201ENST00000554326 538 ntBASIC15□□□□□ -0.01
IGKV2-28A0A075B6P5 MIR3960-201ENST00000583311 91 ntBASIC15□□□□□ -0.01
IGKV2-28A0A075B6P5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC15□□□□□ -0.01
IGKV2-28A0A075B6P5 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
IGKV2-28A0A075B6P5 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IGKV2-28A0A075B6P5 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC15□□□□□ -0.01
IGKV2-28A0A075B6P5 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
IGKV2-28A0A075B6P5 AC092068.2-201ENST00000590491 1708 ntBASIC15□□□□□ -0.01
IGKV2-28A0A075B6P5 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV2-28A0A075B6P5 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV2-28A0A075B6P5 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
IGKV2-28A0A075B6P5 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV2-28A0A075B6P5 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
IGKV2-28A0A075B6P5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV2-28A0A075B6P5 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV2-28A0A075B6P5 PFN2-211ENST00000489155 636 ntTSL 4 BASIC14.99□□□□□ -0.01
IGKV2-28A0A075B6P5 PVT1-219ENST00000523427 938 ntTSL 3 BASIC14.99□□□□□ -0.01
IGKV2-28A0A075B6P5 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC14.99□□□□□ -0.01
IGKV2-28A0A075B6P5 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV2-28A0A075B6P5 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC14.99□□□□□ -0.01
IGKV2-28A0A075B6P5 SMPD5-203ENST00000639008 1464 ntBASIC14.99□□□□□ -0.01
IGKV2-28A0A075B6P5 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV2-28A0A075B6P5 PKD1P6-201ENST00000343738 4769 ntBASIC14.99□□□□□ -0.01
IGKV2-28A0A075B6P5 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV2-28A0A075B6P5 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
IGKV2-28A0A075B6P5 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
IGKV2-28A0A075B6P5 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
IGKV2-28A0A075B6P5 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
IGKV2-28A0A075B6P5 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
IGKV2-28A0A075B6P5 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
IGKV2-28A0A075B6P5 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
IGKV2-28A0A075B6P5 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
IGKV2-28A0A075B6P5 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
IGKV2-28A0A075B6P5 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
IGKV2-28A0A075B6P5 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
IGKV2-28A0A075B6P5 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
IGKV2-28A0A075B6P5 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms