Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.41□□□□□ -0.1
CSNK1G3Q9Y6M4 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 AL645933.1-201ENST00000440087 609 ntBASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 MPRIPP1-201ENST00000452433 1089 ntBASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 PRKXP1-201ENST00000561423 1122 ntBASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 MIR4754-201ENST00000582477 89 ntBASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 REXO1L2P-201ENST00000425429 2069 ntBASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CSNK1G3Q9Y6M4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
CSNK1G3Q9Y6M4 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 AC144522.1-201ENST00000625111 1658 ntBASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 KRT8P21-201ENST00000430398 1491 ntBASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 MPV17-204ENST00000399052 749 ntTSL 4 BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 RPS2P36-201ENST00000456516 831 ntBASIC14.39□□□□□ -0.11
CSNK1G3Q9Y6M4 RN7SL258P-201ENST00000478664 300 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms