Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 HSPB1P2-201ENST00000448722 546 ntBASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 ALG3P1-201ENST00000508806 1114 ntBASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 AP000593.2-201ENST00000542775 1433 ntBASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PCDHB1Q9Y5F3 AP001267.2-201ENST00000532619 2086 ntBASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 AL023775.1-201ENST00000454907 1746 ntBASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 CHMP4BP1-201ENST00000556017 588 ntBASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 BX088702.1-201ENST00000610784 235 ntBASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHB1Q9Y5F3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms