Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PCDHGB4Q9UN71 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGB4Q9UN71 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PCDHGB4Q9UN71 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGB4Q9UN71 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGB4Q9UN71 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGB4Q9UN71 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDHGB4Q9UN71 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDHGB4Q9UN71 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.37□□□□□ -0.11
PCDHGB4Q9UN71 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDHGB4Q9UN71 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDHGB4Q9UN71 NUS1P3-201ENST00000423502 862 ntBASIC14.37□□□□□ -0.11
PCDHGB4Q9UN71 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDHGB4Q9UN71 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDHGB4Q9UN71 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDHGB4Q9UN71 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDHGB4Q9UN71 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGB4Q9UN71 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PCDHGB4Q9UN71 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGB4Q9UN71 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDHGB4Q9UN71 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGB4Q9UN71 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGB4Q9UN71 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGB4Q9UN71 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGB4Q9UN71 CLK3P2-201ENST00000427566 1453 ntBASIC14.37□□□□□ -0.11
PCDHGB4Q9UN71 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGB4Q9UN71 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHGB4Q9UN71 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDHGB4Q9UN71 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
PCDHGB4Q9UN71 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 AL157414.3-201ENST00000624276 1954 ntBASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 AL138799.1-201ENST00000448213 1675 ntBASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 AC022144.1-201ENST00000602255 1580 ntBASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 AC055876.3-201ENST00000431496 288 ntBASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 GAPDHP40-201ENST00000505218 1006 ntBASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 AC009407.1-201ENST00000568958 598 ntBASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 AC138649.4-201ENST00000612222 287 ntBASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 AL158070.2-201ENST00000623713 1621 ntBASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PCDHGB4Q9UN71 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 AC018665.1-201ENST00000622927 1362 ntBASIC14.35□□□□□ -0.11
PCDHGB4Q9UN71 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms