Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 COX11-210ENST00000639671 696 ntBASIC12.95□□□□□ -0.34
CDH20Q9HBT6 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 AC007191.1-201ENST00000623179 2995 ntBASIC12.95□□□□□ -0.34
CDH20Q9HBT6 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDH20Q9HBT6 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 AL136172.1-201ENST00000598590 1394 ntBASIC12.94□□□□□ -0.34
CDH20Q9HBT6 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 AC018529.2-202ENST00000611482 3087 ntBASIC12.94□□□□□ -0.34
CDH20Q9HBT6 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 ANKRD19P-201ENST00000338192 862 ntBASIC12.94□□□□□ -0.34
CDH20Q9HBT6 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 FAM21FP-201ENST00000426241 1131 ntBASIC12.94□□□□□ -0.34
CDH20Q9HBT6 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 HLA-V-201ENST00000429037 534 ntBASIC12.94□□□□□ -0.34
CDH20Q9HBT6 AC026954.1-201ENST00000429771 1293 ntBASIC12.94□□□□□ -0.34
CDH20Q9HBT6 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 RN7SL713P-201ENST00000582127 302 ntBASIC12.94□□□□□ -0.34
CDH20Q9HBT6 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
CDH20Q9HBT6 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CDH20Q9HBT6 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms