Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PAAF1Q9BRP4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 MYADML-201ENST00000474610 2147 ntBASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 AC215219.1-201ENST00000400706 1817 ntBASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 AC026316.1-201ENST00000398900 414 ntBASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 BANF1P3-201ENST00000412556 261 ntBASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 AC073352.2-201ENST00000609385 439 ntBASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 TNRC18P2-201ENST00000417666 2714 ntBASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
PAAF1Q9BRP4 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 RHEB-207ENST00000496004 744 ntTSL 2 BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.54■□□□□ 0.08
PAAF1Q9BRP4 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.53■□□□□ 0.08
PAAF1Q9BRP4 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
PAAF1Q9BRP4 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PAAF1Q9BRP4 AGGF1P1-201ENST00000509500 2073 ntBASIC15.53■□□□□ 0.08
PAAF1Q9BRP4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PAAF1Q9BRP4 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms