Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.49■□□□□ 0.07
CASD1Q96PB1 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASD1Q96PB1 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASD1Q96PB1 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASD1Q96PB1 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CASD1Q96PB1 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASD1Q96PB1 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CASD1Q96PB1 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.48■□□□□ 0.07
CASD1Q96PB1 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.48■□□□□ 0.07
CASD1Q96PB1 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASD1Q96PB1 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.48■□□□□ 0.07
CASD1Q96PB1 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASD1Q96PB1 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC15.48■□□□□ 0.07
CASD1Q96PB1 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASD1Q96PB1 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.48■□□□□ 0.07
CASD1Q96PB1 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CASD1Q96PB1 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CASD1Q96PB1 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASD1Q96PB1 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
CASD1Q96PB1 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASD1Q96PB1 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CASD1Q96PB1 AL354702.1-201ENST00000442006 1960 ntBASIC15.48■□□□□ 0.07
CASD1Q96PB1 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASD1Q96PB1 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASD1Q96PB1 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASD1Q96PB1 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CASD1Q96PB1 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASD1Q96PB1 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CASD1Q96PB1 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASD1Q96PB1 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.48■□□□□ 0.07
CASD1Q96PB1 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC15.48■□□□□ 0.07
CASD1Q96PB1 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC15.48■□□□□ 0.07
CASD1Q96PB1 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC15.48■□□□□ 0.07
CASD1Q96PB1 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC15.48■□□□□ 0.07
CASD1Q96PB1 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CASD1Q96PB1 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.48■□□□□ 0.07
CASD1Q96PB1 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASD1Q96PB1 HERC2P11-201ENST00000562845 725 ntBASIC15.48■□□□□ 0.07
CASD1Q96PB1 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC15.48■□□□□ 0.07
CASD1Q96PB1 AC100756.2-201ENST00000569537 736 ntBASIC15.48■□□□□ 0.07
CASD1Q96PB1 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CASD1Q96PB1 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CASD1Q96PB1 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASD1Q96PB1 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASD1Q96PB1 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.48■□□□□ 0.07
CASD1Q96PB1 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CASD1Q96PB1 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
CASD1Q96PB1 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CASD1Q96PB1 LINC01815-202ENST00000641468 1409 ntBASIC15.48■□□□□ 0.07
CASD1Q96PB1 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASD1Q96PB1 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.48■□□□□ 0.07
CASD1Q96PB1 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CASD1Q96PB1 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CASD1Q96PB1 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CASD1Q96PB1 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASD1Q96PB1 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CASD1Q96PB1 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASD1Q96PB1 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASD1Q96PB1 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CASD1Q96PB1 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.48■□□□□ 0.07
CASD1Q96PB1 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CASD1Q96PB1 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CASD1Q96PB1 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CASD1Q96PB1 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.47■□□□□ 0.07
CASD1Q96PB1 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CASD1Q96PB1 MYADML-201ENST00000474610 2147 ntBASIC15.47■□□□□ 0.07
CASD1Q96PB1 TCAF2P1-201ENST00000291129 2421 ntBASIC15.47■□□□□ 0.07
CASD1Q96PB1 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.47■□□□□ 0.07
CASD1Q96PB1 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CASD1Q96PB1 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.47■□□□□ 0.07
CASD1Q96PB1 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CASD1Q96PB1 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CASD1Q96PB1 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CASD1Q96PB1 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CASD1Q96PB1 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CASD1Q96PB1 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CASD1Q96PB1 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC15.47■□□□□ 0.07
CASD1Q96PB1 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CASD1Q96PB1 AC097065.1-201ENST00000425737 517 ntBASIC15.47■□□□□ 0.07
CASD1Q96PB1 AL161932.2-201ENST00000435436 679 ntBASIC15.47■□□□□ 0.07
CASD1Q96PB1 AC092638.2-201ENST00000441105 947 ntBASIC15.47■□□□□ 0.07
CASD1Q96PB1 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC15.47■□□□□ 0.07
CASD1Q96PB1 RNA5SP417-201ENST00000516459 108 ntBASIC15.47■□□□□ 0.07
CASD1Q96PB1 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC15.47■□□□□ 0.07
CASD1Q96PB1 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC15.47■□□□□ 0.07
CASD1Q96PB1 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC15.47■□□□□ 0.07
CASD1Q96PB1 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC15.47■□□□□ 0.07
CASD1Q96PB1 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC15.47■□□□□ 0.07
CASD1Q96PB1 AC009145.4-201ENST00000625119 1294 ntBASIC15.47■□□□□ 0.07
CASD1Q96PB1 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CASD1Q96PB1 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CASD1Q96PB1 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CASD1Q96PB1 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CASD1Q96PB1 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CASD1Q96PB1 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CASD1Q96PB1 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CASD1Q96PB1 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CASD1Q96PB1 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CASD1Q96PB1 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CASD1Q96PB1 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms