Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
RNF31Q96EP0 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.29□□□□□ -0.12
RNF31Q96EP0 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.29□□□□□ -0.12
RNF31Q96EP0 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNF31Q96EP0 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.29□□□□□ -0.12
RNF31Q96EP0 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF31Q96EP0 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF31Q96EP0 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF31Q96EP0 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF31Q96EP0 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RNF31Q96EP0 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNF31Q96EP0 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF31Q96EP0 LINC01101-201ENST00000622953 1884 ntBASIC14.29□□□□□ -0.12
RNF31Q96EP0 AC020658.6-201ENST00000623564 1870 ntBASIC14.29□□□□□ -0.12
RNF31Q96EP0 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNF31Q96EP0 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF31Q96EP0 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.29□□□□□ -0.12
RNF31Q96EP0 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF31Q96EP0 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF31Q96EP0 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RNF31Q96EP0 AC013726.1-201ENST00000563747 2285 ntBASIC14.29□□□□□ -0.12
RNF31Q96EP0 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RNF31Q96EP0 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF31Q96EP0 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RNF31Q96EP0 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF31Q96EP0 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF31Q96EP0 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.28□□□□□ -0.12
RNF31Q96EP0 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RNF31Q96EP0 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RNF31Q96EP0 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF31Q96EP0 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF31Q96EP0 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF31Q96EP0 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF31Q96EP0 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF31Q96EP0 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF31Q96EP0 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.28□□□□□ -0.12
RNF31Q96EP0 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF31Q96EP0 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF31Q96EP0 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
RNF31Q96EP0 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF31Q96EP0 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RNF31Q96EP0 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
RNF31Q96EP0 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF31Q96EP0 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.28□□□□□ -0.12
RNF31Q96EP0 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.28□□□□□ -0.12
RNF31Q96EP0 E2F3P2-201ENST00000447755 1422 ntBASIC14.28□□□□□ -0.12
RNF31Q96EP0 SPTLC1P5-201ENST00000450718 252 ntBASIC14.28□□□□□ -0.12
RNF31Q96EP0 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
RNF31Q96EP0 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF31Q96EP0 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF31Q96EP0 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF31Q96EP0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.28□□□□□ -0.12
RNF31Q96EP0 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF31Q96EP0 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF31Q96EP0 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.28□□□□□ -0.12
RNF31Q96EP0 AL136301.1-201ENST00000615830 422 ntBASIC14.28□□□□□ -0.12
RNF31Q96EP0 AC244157.2-201ENST00000616239 1006 ntBASIC14.28□□□□□ -0.12
RNF31Q96EP0 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF31Q96EP0 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF31Q96EP0 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF31Q96EP0 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RNF31Q96EP0 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF31Q96EP0 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF31Q96EP0 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RNF31Q96EP0 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
RNF31Q96EP0 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF31Q96EP0 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RNF31Q96EP0 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.27□□□□□ -0.12
RNF31Q96EP0 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
RNF31Q96EP0 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF31Q96EP0 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RNF31Q96EP0 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.27□□□□□ -0.12
RNF31Q96EP0 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF31Q96EP0 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
RNF31Q96EP0 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.27□□□□□ -0.12
RNF31Q96EP0 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF31Q96EP0 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF31Q96EP0 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNF31Q96EP0 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.27□□□□□ -0.12
RNF31Q96EP0 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RNF31Q96EP0 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF31Q96EP0 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.27□□□□□ -0.13
RNF31Q96EP0 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF31Q96EP0 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.27□□□□□ -0.13
RNF31Q96EP0 ACTG1P2-201ENST00000415776 1125 ntBASIC14.27□□□□□ -0.13
RNF31Q96EP0 AC079178.1-201ENST00000420915 656 ntBASIC14.27□□□□□ -0.13
RNF31Q96EP0 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF31Q96EP0 ACTG1P11-201ENST00000425411 1125 ntBASIC14.27□□□□□ -0.13
RNF31Q96EP0 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.27□□□□□ -0.13
RNF31Q96EP0 CHMP1AP1-201ENST00000445563 662 ntBASIC14.27□□□□□ -0.13
RNF31Q96EP0 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNF31Q96EP0 SCARNA20.5-201ENST00000516991 142 ntBASIC14.27□□□□□ -0.13
RNF31Q96EP0 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.27□□□□□ -0.13
RNF31Q96EP0 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC14.27□□□□□ -0.13
RNF31Q96EP0 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RNF31Q96EP0 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.27□□□□□ -0.13
RNF31Q96EP0 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.27□□□□□ -0.13
RNF31Q96EP0 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.27□□□□□ -0.13
RNF31Q96EP0 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.27□□□□□ -0.13
RNF31Q96EP0 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms