Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 SSR4-202ENST00000370085 526 ntTSL 2 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 TBC1D3P6-201ENST00000505954 962 ntBASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 TMA16-204ENST00000508268 608 ntTSL 2 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 DERL2-206ENST00000572834 589 ntTSL 3 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
ALMS1Q8TCU4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 RNU1-80P-201ENST00000459500 161 ntBASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 AL954722.1-201ENST00000431238 259 ntBASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 GALP-202ENST00000440823 889 ntTSL 5 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 AC007679.1-201ENST00000458609 502 ntBASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 GARS-210ENST00000627489 324 ntTSL 4 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 PES1P2-201ENST00000449745 1735 ntBASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 GRPEL2P1-201ENST00000453145 339 ntBASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 RNA5SP420-201ENST00000516997 137 ntBASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 CLPP-205ENST00000596605 646 ntTSL 2 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 AC005722.1-201ENST00000431878 964 ntBASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 AP000920.1-201ENST00000531824 344 ntBASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC9.53□□□□□ -0.88
ALMS1Q8TCU4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
ALMS1Q8TCU4 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC9.52□□□□□ -0.88
ALMS1Q8TCU4 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms