Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RNF217Q8TC41 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
RNF217Q8TC41 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RNF217Q8TC41 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF217Q8TC41 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF217Q8TC41 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF217Q8TC41 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.38□□□□□ -0.11
RNF217Q8TC41 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RNF217Q8TC41 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF217Q8TC41 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF217Q8TC41 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF217Q8TC41 AL035456.1-201ENST00000456064 1369 ntBASIC14.38□□□□□ -0.11
RNF217Q8TC41 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF217Q8TC41 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF217Q8TC41 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC14.38□□□□□ -0.11
RNF217Q8TC41 PCDHB18P-202ENST00000526308 3197 ntBASIC14.38□□□□□ -0.11
RNF217Q8TC41 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.38□□□□□ -0.11
RNF217Q8TC41 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RNF217Q8TC41 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.38□□□□□ -0.11
RNF217Q8TC41 HCG24-202ENST00000414398 717 ntTSL 3 BASIC14.38□□□□□ -0.11
RNF217Q8TC41 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.38□□□□□ -0.11
RNF217Q8TC41 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF217Q8TC41 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF217Q8TC41 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.38□□□□□ -0.11
RNF217Q8TC41 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.38□□□□□ -0.11
RNF217Q8TC41 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.38□□□□□ -0.11
RNF217Q8TC41 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
RNF217Q8TC41 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.38□□□□□ -0.11
RNF217Q8TC41 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.38□□□□□ -0.11
RNF217Q8TC41 AC009093.7-201ENST00000623853 1223 ntBASIC14.38□□□□□ -0.11
RNF217Q8TC41 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.38□□□□□ -0.11
RNF217Q8TC41 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF217Q8TC41 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF217Q8TC41 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF217Q8TC41 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.38□□□□□ -0.11
RNF217Q8TC41 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF217Q8TC41 DRC7-203ENST00000394337 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF217Q8TC41 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF217Q8TC41 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF217Q8TC41 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RNF217Q8TC41 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF217Q8TC41 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF217Q8TC41 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RNF217Q8TC41 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RNF217Q8TC41 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
RNF217Q8TC41 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RNF217Q8TC41 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF217Q8TC41 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF217Q8TC41 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RNF217Q8TC41 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RNF217Q8TC41 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.37□□□□□ -0.11
RNF217Q8TC41 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RNF217Q8TC41 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF217Q8TC41 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RNF217Q8TC41 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
RNF217Q8TC41 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF217Q8TC41 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RNF217Q8TC41 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RNF217Q8TC41 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.37□□□□□ -0.11
RNF217Q8TC41 GPS2P2-201ENST00000430745 888 ntBASIC14.37□□□□□ -0.11
RNF217Q8TC41 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.37□□□□□ -0.11
RNF217Q8TC41 EEF1DP4-201ENST00000446006 880 ntBASIC14.37□□□□□ -0.11
RNF217Q8TC41 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.37□□□□□ -0.11
RNF217Q8TC41 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.37□□□□□ -0.11
RNF217Q8TC41 BANF1P1-201ENST00000553684 263 ntBASIC14.37□□□□□ -0.11
RNF217Q8TC41 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.37□□□□□ -0.11
RNF217Q8TC41 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.37□□□□□ -0.11
RNF217Q8TC41 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.37□□□□□ -0.11
RNF217Q8TC41 AC097359.3-201ENST00000603982 1210 ntBASIC14.37□□□□□ -0.11
RNF217Q8TC41 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC14.37□□□□□ -0.11
RNF217Q8TC41 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RNF217Q8TC41 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.37□□□□□ -0.11
RNF217Q8TC41 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF217Q8TC41 AL731571.1-201ENST00000617058 5428 ntBASIC14.37□□□□□ -0.11
RNF217Q8TC41 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RNF217Q8TC41 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RNF217Q8TC41 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF217Q8TC41 AC022497.1-201ENST00000624916 3691 ntBASIC14.37□□□□□ -0.11
RNF217Q8TC41 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF217Q8TC41 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF217Q8TC41 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF217Q8TC41 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
RNF217Q8TC41 AC011474.4-201ENST00000623523 2076 ntBASIC14.37□□□□□ -0.11
RNF217Q8TC41 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RNF217Q8TC41 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNF217Q8TC41 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
RNF217Q8TC41 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF217Q8TC41 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF217Q8TC41 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF217Q8TC41 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RNF217Q8TC41 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC14.36□□□□□ -0.11
RNF217Q8TC41 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF217Q8TC41 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF217Q8TC41 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF217Q8TC41 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF217Q8TC41 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF217Q8TC41 CETN4P-206ENST00000642099 2168 ntBASIC14.36□□□□□ -0.11
RNF217Q8TC41 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RNF217Q8TC41 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF217Q8TC41 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms